G234042


Basic Information

Item Value
gene id G234042
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 7629577 ~ 7630828 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU265538
GTCCCAGAAAGGCGGGTCTGGAGCTAGGCGGGAGGTGAACACATATGTAATACACAGGAGCCCCGGAGAGCGCAACAATGATTCCCACCAGAGAGTTTATGGTGTCACTGTAGAGTGGTACAATCACCAGAAACACGCTGCACATACAGTACACTATAGGGAAGAACAGACTCAGCTACATGGAAACAAAAACACACAGAGTCAATTAAGCACTTCATAAACCAGGGCAATAAAGAAATAAAAACATCAACTGTTTTGCAAGCATTAAATATTGCTATTATCTAAGTATTTTAAGGCATCATAAATGTGCTCCTGATTCACGAACCACCCACACTCCATTATCTGAACGATGTAGCCATCTGATGCATATGGCACAAAAAACTTGAAACACTTTCACAAAGGCAAAAGTCTAAATCTGACTGGTCTTGACAATGCAAGAGGTGAGCACTCTGTAAAGTCTCCTCCAGCACAACCCAAAGACTTTCAATGAATTTAAGGTCTGGACTCAGAGGTGCCAATTCATGTGTGAAAATGATTCTTCATGCTCTCTCCCAACCATTTTTTCACAATTTGAGCCTTATGAATCTTGACATTGTCATCCTGGAATATGGCCATGACGTGTCATCCTACATGGTTGTTTAAGAAATGAAAAGCTACACACTCCATCTTTAAAGCTTAAAAGAACTGTTCCCAAACATGTAACATGCTAGAAACATAATAATCACAGCAATAATGATACAGTCAGACTCTGTATTTGCCTATTTAAATCCAAACAGCGACTTTTTTTGCCAGTCAGTGTATATCCAGGGAAACGGATCCTTGAACAAGAAAAAAAAAAAAAAAAAAATATGTAGGGCTGGACTTGATTTTGTCCATCAGGAATTGATTGATCTTTGATCGTTTTGGTTTAGTTTTGCTGCGATCTCATTCATGATCTCATGAGTGACAGGTTGTCCCGCCCTTGCGCCGAAAAACATAGCTTCCTCTGATGATATTTAGAATAAAGATTATAAGGGAACATAAATTTTCTATAATAAATTCTTTAAAAAAAAATGTATTAAAAATGTTAACTACAGGAACCCGAATGTTGCACTTTACTGAAATCAATTGTGAGTTAAAGGGTTAGTTCACCCAAAAATGAAAATTCTGTCATTAATTAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU265538 True 1160 lncRNA 0.38 2 7629577 7630828

Neighbor

gene id symbol gene type direction distance location
CI01000054_07607425_07611037 STMN2A, STMN2B, STMN2 coding downstream 18540 7606500 ~ 7611037 (-)
CI01000054_07516390_07526784 TPD52 coding downstream 102128 7516167 ~ 7527449 (-)
CI01000054_07418471_07418846 NA coding downstream 210724 7418167 ~ 7418853 (-)
CI01000054_07398765_07399272 NA coding downstream 229523 7398554 ~ 7400054 (-)
CI01000054_07390631_07391977 MRPL53 coding downstream 236474 7390586 ~ 7393103 (-)
CI01000054_07642350_07658894 NA coding upstream 10972 7641800 ~ 7660515 (-)
CI01000054_07712126_07718933 GMNN coding upstream 81207 7712035 ~ 7718933 (-)
CI01000054_07723457_07725732 ACOT13 coding upstream 92580 7723408 ~ 7725732 (-)
CI01000054_07737375_07747797 TMEM64 coding upstream 106426 7737254 ~ 7747797 (-)
CI01000054_07793409_07805739 TMEM55A coding upstream 162371 7793199 ~ 7805739 (-)
G234025 NA non-coding downstream 62068 7567234 ~ 7567509 (-)
G234024 NA non-coding downstream 62391 7566956 ~ 7567186 (-)
G234023 NA non-coding downstream 63052 7566239 ~ 7566525 (-)
G233942 NA non-coding downstream 119919 7508368 ~ 7509658 (-)
G233922 NA non-coding downstream 291461 7337904 ~ 7338116 (-)
G234039 NA non-coding upstream 2174 7633002 ~ 7634751 (-)
G234057 NA non-coding upstream 6674 7637502 ~ 7637975 (-)
G234071 NA non-coding upstream 70047 7700875 ~ 7704166 (-)
G234097 NA non-coding upstream 75268 7706096 ~ 7707359 (-)
G234066 NA non-coding upstream 103827 7734655 ~ 7736512 (-)
CI01000054_07165957_07169539 HEYL other downstream 457904 7165435 ~ 7169539 (-)
CI01000054_06629482_06641861 TRIQK other downstream 975564 6628082 ~ 6642160 (-)
G232274 NA other downstream 2420337 5206199 ~ 5209240 (-)
CI01000054_04671351_04681181 PEF1 other downstream 2957344 4670151 ~ 4681361 (-)
G231645 NA other downstream 3646754 3981847 ~ 3982823 (-)
G235216 NA other upstream 1617211 9248039 ~ 9248538 (-)
CI01000054_09483912_09484282 MRPL36 other upstream 1852319 9483147 ~ 9484282 (-)
CI01000054_09864693_09866871 PPP1R11 other upstream 2232493 9863321 ~ 9867212 (-)
CI01000054_10817235_10819181 TAC1 other upstream 3173043 10816015 ~ 10819362 (-)
CI01000054_10872970_10881017 SDHAF3 other upstream 3240276 10871104 ~ 10881495 (-)

Expression


Co-expression Network