G233096


Basic Information

Item Value
gene id G233096
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 7731855 ~ 7732104 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU264517
ATATATATATATATATATATATATAAATATAATAGGTAAATATCACTTGCAAACAATATTGTTATTGAGCATTATTACCAATCAAACTGTAATTTTGTGCAAAAAGTGTGAAAATACTATTGTGTATTTTGAATACATGAAATTGGCAAGCAAGACAAAGGAGTCTGCCATTTTGTTCCAAAAATGTCATTTCCATTACAGAATGCTAATAAACAAATTCATGTTCTGATGCTTAAACTATCAGGGTCAG

Function

NR:

description
PREDICTED: valine--tRNA ligase-like isoform X6

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU264517 True 250 lncRNA 0.27 1 7731855 7732104

Neighbor

gene id symbol gene type direction distance location
CI01000054_07726558_07730944 TDP2B, TDP2 coding upstream 844 7726558 ~ 7731011 (+)
CI01000054_07719547_07722201 C11H6ORF62, CUNH6ORF62, C3H6ORF62, CLG10H6ORF62, C12H6ORF62, C23H6ORF62, C6H6ORF62, C18H6ORF62, CLG22H6ORF62, C6ORF62, CSGR19H6ORF62, C4H6ORF62, C24H6ORF62, C2H6ORF62, CLG11H6ORF62, C16H6ORF62, BC005537 coding upstream 9584 7719497 ~ 7722271 (+)
CI01000054_07675827_07711906 FAM65B coding upstream 19873 7675827 ~ 7711982 (+)
CI01000054_07620269_07633084 NA coding upstream 98744 7618737 ~ 7633111 (+)
CI01000054_07599184_07601743 HEY1 coding upstream 128730 7597906 ~ 7603125 (+)
CI01000054_07755766_07787767 NA coding downstream 23662 7755766 ~ 7788110 (+)
CI01000054_07816225_07819805 TMEM106B, T106B, TMEM106BB coding downstream 84121 7816225 ~ 7820975 (+)
CI01000054_07836152_07845992 SCIN coding downstream 103500 7835604 ~ 7846232 (+)
CI01000054_07852818_07853423 ARL4AB, ARL4A coding downstream 120297 7852401 ~ 7854477 (+)
CI01000054_07997892_08012569 BZW2 coding downstream 265788 7997892 ~ 8012883 (+)
G233018 NA non-coding upstream 215249 7514404 ~ 7516606 (+)
G233017 NA non-coding upstream 218155 7508766 ~ 7513700 (+)
G233065 NA non-coding upstream 310498 7420428 ~ 7421357 (+)
G233053 NA non-coding upstream 340961 7390578 ~ 7390894 (+)
G233051 NA non-coding upstream 342278 7389362 ~ 7389577 (+)
G233025 NA non-coding downstream 2717 7734821 ~ 7736502 (+)
G233030 NA non-coding downstream 53973 7786077 ~ 7812277 (+)
G233026 NA non-coding downstream 58926 7791030 ~ 7793543 (+)
G233123 NA non-coding downstream 97166 7829270 ~ 7829472 (+)
G233127 NA non-coding downstream 100628 7832732 ~ 7832945 (+)
G233024 NA other upstream 121962 7567523 ~ 7609893 (+)
G232870 NA other upstream 843352 6887912 ~ 6888503 (+)
G232659 NA other upstream 1355961 6374850 ~ 6375894 (+)
CI01000054_06305908_06312122 NA other upstream 1424995 6305908 ~ 6312163 (+)
G232558 NA other upstream 1689992 5993660 ~ 6041863 (+)
G233306 NA other downstream 572495 8304599 ~ 8304949 (+)
CI01000054_08325126_08329621 HPCAL4, VSNL1, VSNL1.S other downstream 573833 8325126 ~ 8329716 (+)
G235560 NA other downstream 2656032 10388136 ~ 10392378 (+)
CI01000054_11564820_11568338 S100V2 other downstream 3832872 11564820 ~ 11568999 (+)
CI01000054_11633235_11635069 PRF1.8 other downstream 3900872 11632959 ~ 11635103 (+)

Expression


Co-expression Network