G233127


Basic Information

Item Value
gene id G233127
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 7832732 ~ 7832945 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU264548
TATTCCGAAGTAAAATGGGCAAAATATGAAACTTGAGACTTTGAGACATATGAGACTTTGTTTCATGTCAAAAGCAACAAACCACAAATCATATTTTGTGATTTATTGGATGGTTATGTATCCTCGCGCTTTTTTAAGTGGGTATACGGAAATCCTTGAACATTCCTAGTGGGTATACGGCGTATACCTGCGTATCACGTATACTACACCACTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU264548 True 214 lncRNA 0.37 1 7832732 7832945

Neighbor

gene id symbol gene type direction distance location
CI01000054_07816225_07819805 TMEM106B, T106B, TMEM106BB coding upstream 11757 7816225 ~ 7820975 (+)
CI01000054_07755766_07787767 NA coding upstream 44622 7755766 ~ 7788110 (+)
CI01000054_07726558_07730944 TDP2B, TDP2 coding upstream 101721 7726558 ~ 7731011 (+)
CI01000054_07719547_07722201 C11H6ORF62, CUNH6ORF62, C3H6ORF62, CLG10H6ORF62, C12H6ORF62, C23H6ORF62, C6H6ORF62, C18H6ORF62, CLG22H6ORF62, C6ORF62, CSGR19H6ORF62, C4H6ORF62, C24H6ORF62, C2H6ORF62, CLG11H6ORF62, C16H6ORF62, BC005537 coding upstream 110461 7719497 ~ 7722271 (+)
CI01000054_07675827_07711906 FAM65B coding upstream 120750 7675827 ~ 7711982 (+)
CI01000054_07836152_07845992 SCIN coding downstream 2659 7835604 ~ 7846232 (+)
CI01000054_07852818_07853423 ARL4AB, ARL4A coding downstream 19456 7852401 ~ 7854477 (+)
CI01000054_07997892_08012569 BZW2 coding downstream 164947 7997892 ~ 8012883 (+)
CI01000054_08013660_08018583 RBBP7, RBBP4.L, RBBP4.S, RBBP4 coding downstream 180715 8013660 ~ 8018741 (+)
CI01000054_08056620_08072625 NA coding downstream 223561 8056506 ~ 8073345 (+)
G233123 NA non-coding upstream 3260 7829270 ~ 7829472 (+)
G233030 NA non-coding upstream 20455 7786077 ~ 7812277 (+)
G233026 NA non-coding upstream 39189 7791030 ~ 7793543 (+)
G233025 NA non-coding upstream 96230 7734821 ~ 7736502 (+)
G233096 NA non-coding upstream 100628 7731855 ~ 7732104 (+)
G233131 NA non-coding downstream 14596 7847541 ~ 7848125 (+)
G233132 NA non-coding downstream 15905 7848850 ~ 7849124 (+)
G233133 NA non-coding downstream 16186 7849131 ~ 7849454 (+)
G233152 NA non-coding downstream 56635 7889580 ~ 7889810 (+)
G233180 NA non-coding downstream 97842 7930787 ~ 7931070 (+)
G233024 NA other upstream 222839 7567523 ~ 7609893 (+)
G232870 NA other upstream 944229 6887912 ~ 6888503 (+)
G232659 NA other upstream 1456838 6374850 ~ 6375894 (+)
CI01000054_06305908_06312122 NA other upstream 1525872 6305908 ~ 6312163 (+)
G232558 NA other upstream 1790869 5993660 ~ 6041863 (+)
G233306 NA other downstream 471654 8304599 ~ 8304949 (+)
CI01000054_08325126_08329621 HPCAL4, VSNL1, VSNL1.S other downstream 472992 8325126 ~ 8329716 (+)
G235560 NA other downstream 2555191 10388136 ~ 10392378 (+)
CI01000054_11564820_11568338 S100V2 other downstream 3732031 11564820 ~ 11568999 (+)
CI01000054_11633235_11635069 PRF1.8 other downstream 3800031 11632959 ~ 11635103 (+)

Expression


Co-expression Network