G234065


Basic Information

Item Value
gene id G234065
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 7836063 ~ 7836840 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU265564
AGGAGACCCAGTACCGGCTTCTGAGAATGAACTTTACAACCTTCATATTACTAAAGCGTCCTTTTTATAGGGGCCATATACTTTGCTCAGGCTATCTGTTGGTGTATTTACAATATGCTCATTTGAGTATCATTTCAGGTGATTTGCTGTCGTCTTTCCTCAACCTTTTATGTAGTGACTGAGATTTTGCAGTTTCTTTTTTCTCAAATAATCATCATTCATACAGATCTGGACAAAAGTTTGCGAATATAACTTTGACCTGATACCCTCTTGAACGTTTAAGGTACTAGATTAGTAAAGGTACTGAGATAGTTAAGGTGCTGAGATTAGACATTTTACTGTTTAATTGCATTCACATGCACTTTTGAGTAAAGAATATATAATATAATATAATATAATATAATATAATATTTGTGTTAAGAGTTGATTCAAAACATTTAAGCTCTTCTCTAAAGTACAGAACAACTACTGCTTACCCAGCCAGAAATGCAGATCATAGAAACACGAGTTCTTCTGTTTGACAGTGTGGAGCACCAGGTAGGCATCACCTATGTAGAAGTTCCCATGTAAGTTGTCAGGCACAGGGACCAGTTCCATCTTTTCAATTCTCCATATCTGGAGACCGGCGTTTTGGCCAGCCCGCTCGAACTCTTTGTGGTGAAGCCCCATGTCTGAGAGAGGTGTGCGCAGATGAGCTGAGAGGCAGACAGTGTACTTCTGTGGCCTGACAGCACTGAATCAATAACAGCAGTGTGCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU265564 True 758 lncRNA 0.39 2 7836063 7836840

Neighbor

gene id symbol gene type direction distance location
CI01000054_07793409_07805739 TMEM55A coding downstream 30324 7793199 ~ 7805739 (-)
CI01000054_07737375_07747797 TMEM64 coding downstream 88266 7737254 ~ 7747797 (-)
CI01000054_07723457_07725732 ACOT13 coding downstream 110331 7723408 ~ 7725732 (-)
CI01000054_07712126_07718933 GMNN coding downstream 117130 7712035 ~ 7718933 (-)
CI01000054_07642350_07658894 NA coding downstream 175548 7641800 ~ 7660515 (-)
CI01000054_07874540_07894985 NA coding upstream 37404 7874244 ~ 7895322 (-)
CI01000054_07936687_07947936 MEOX2B, MEOX2 coding upstream 99631 7936471 ~ 7947936 (-)
CI01000054_07978918_07980431 SOSTDC1B coding upstream 141649 7978489 ~ 7980475 (-)
CI01000054_07985093_07994157 NA coding upstream 147963 7984803 ~ 7994931 (-)
CI01000054_08021522_08026014 NA coding upstream 184103 8020943 ~ 8026014 (-)
G234131 NA non-coding downstream 1442 7834072 ~ 7834621 (-)
G234129 NA non-coding downstream 3361 7832492 ~ 7832702 (-)
G234128 NA non-coding downstream 4708 7831113 ~ 7831355 (-)
G234126 NA non-coding downstream 6925 7828886 ~ 7829138 (-)
G234120 NA non-coding downstream 17800 7816231 ~ 7818263 (-)
G234167 NA non-coding upstream 63698 7900538 ~ 7900780 (-)
G234207 NA non-coding upstream 194055 8030895 ~ 8031398 (-)
G234210 NA non-coding upstream 202559 8039399 ~ 8039797 (-)
G234220 NA non-coding upstream 284338 8121178 ~ 8121700 (-)
G234268 NA non-coding upstream 374230 8211070 ~ 8211278 (-)
CI01000054_07165957_07169539 HEYL other downstream 664390 7165435 ~ 7169539 (-)
CI01000054_06629482_06641861 TRIQK other downstream 1182050 6628082 ~ 6642160 (-)
G232274 NA other downstream 2626823 5206199 ~ 5209240 (-)
CI01000054_04671351_04681181 PEF1 other downstream 3163830 4670151 ~ 4681361 (-)
G231645 NA other downstream 3853240 3981847 ~ 3982823 (-)
G235216 NA other upstream 1411199 9248039 ~ 9248538 (-)
CI01000054_09483912_09484282 MRPL36 other upstream 1646307 9483147 ~ 9484282 (-)
CI01000054_09864693_09866871 PPP1R11 other upstream 2026481 9863321 ~ 9867212 (-)
CI01000054_10817235_10819181 TAC1 other upstream 2967031 10816015 ~ 10819362 (-)
CI01000054_10872970_10881017 SDHAF3 other upstream 3034264 10871104 ~ 10881495 (-)

Expression


Co-expression Network