G233152


Basic Information

Item Value
gene id G233152
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 7889580 ~ 7889810 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU264576
CAAAGACCGATACCTCACGTGACGTAACTGACAGAATTTTCCGTGCACAGAGACACCGATGGCAGCAGCAGAAACAATGTCAGCCTCAGAGGTGTGGAAATACTTCAAATTAATGATGACAACACACACATTGCGAACTGCATGCTTTCAATCACAATTCGTTATCGATTAGTGAAGGCGGGATAGGCAGAATCGCGCTGAATGACACAGACCAGAAGCGCTCTCTCTCTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU264576 True 231 lncRNA 0.47 1 7889580 7889810

Neighbor

gene id symbol gene type direction distance location
CI01000054_07852818_07853423 ARL4AB, ARL4A coding upstream 35103 7852401 ~ 7854477 (+)
CI01000054_07836152_07845992 SCIN coding upstream 43348 7835604 ~ 7846232 (+)
CI01000054_07816225_07819805 TMEM106B, T106B, TMEM106BB coding upstream 68605 7816225 ~ 7820975 (+)
CI01000054_07755766_07787767 NA coding upstream 101470 7755766 ~ 7788110 (+)
CI01000054_07726558_07730944 TDP2B, TDP2 coding upstream 158569 7726558 ~ 7731011 (+)
CI01000054_07997892_08012569 BZW2 coding downstream 108082 7997892 ~ 8012883 (+)
CI01000054_08013660_08018583 RBBP7, RBBP4.L, RBBP4.S, RBBP4 coding downstream 123850 8013660 ~ 8018741 (+)
CI01000054_08056620_08072625 NA coding downstream 166696 8056506 ~ 8073345 (+)
CI01000054_08081739_08089067 NA coding downstream 191343 8081153 ~ 8089811 (+)
CI01000054_08149724_08152046 MYCLB coding downstream 259047 8148857 ~ 8152968 (+)
G233133 NA non-coding upstream 40126 7849131 ~ 7849454 (+)
G233132 NA non-coding upstream 40456 7848850 ~ 7849124 (+)
G233131 NA non-coding upstream 41455 7847541 ~ 7848125 (+)
G233127 NA non-coding upstream 56635 7832732 ~ 7832945 (+)
G233123 NA non-coding upstream 60108 7829270 ~ 7829472 (+)
G233180 NA non-coding downstream 40977 7930787 ~ 7931070 (+)
G233183 NA non-coding downstream 44575 7934385 ~ 7934637 (+)
G233198 NA non-coding downstream 90935 7980745 ~ 7981168 (+)
G233199 NA non-coding downstream 91503 7981313 ~ 7981956 (+)
G233200 NA non-coding downstream 93789 7983599 ~ 7983836 (+)
G233024 NA other upstream 279687 7567523 ~ 7609893 (+)
G232870 NA other upstream 1001077 6887912 ~ 6888503 (+)
G232659 NA other upstream 1513686 6374850 ~ 6375894 (+)
CI01000054_06305908_06312122 NA other upstream 1582720 6305908 ~ 6312163 (+)
G232558 NA other upstream 1847717 5993660 ~ 6041863 (+)
G233306 NA other downstream 414789 8304599 ~ 8304949 (+)
CI01000054_08325126_08329621 HPCAL4, VSNL1, VSNL1.S other downstream 416127 8325126 ~ 8329716 (+)
G235560 NA other downstream 2498326 10388136 ~ 10392378 (+)
CI01000054_11564820_11568338 S100V2 other downstream 3675166 11564820 ~ 11568999 (+)
CI01000054_11633235_11635069 PRF1.8 other downstream 3743166 11632959 ~ 11635103 (+)

Expression


Co-expression Network