G234298



Basic Information


Item Value
gene id G234298
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 8284272 ~ 8284602 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU265820
GCACGATTCTGGATTTTTTGGTTTCAAATAGAGATCACGATTCTCCCACGATTCTGAATATACAACCAAACAAAATAACATGTAATTTACTAGAGGTTCTGACAAAATATAAATTGCTGACTCTAATTGCTGGAAAATGTTTGAATGAATTATTTAAAAAATGGTTTTGAATGAATTCAATGACTCATTAATAAATACTTGTTTCATTGCTGGATGAATCAGTGTTTTTGAACGAATCTTTTGAATGAACGATTCAATGACAAATACATTTTTTAACAGTCAGTTGTCGCCACCTAGTGGAATTAGATGTAATTGATACAACCGTTATTTG

Function


NR:

description
PREDICTED: obscurin-like protein 1

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU265820 True 331 lncRNA 0.31 1 8284272 8284602

Neighbor


gene id symbol gene type direction distance location
CI01000054_08228712_08238666 FAM49A, FA49A coding downstream 45606 8228661 ~ 8238666 (-)
CI01000054_08099220_08112291 NA coding downstream 171981 8097675 ~ 8112291 (-)
CI01000054_08091223_08096443 YARS coding downstream 187829 8090597 ~ 8096443 (-)
CI01000054_08032736_08043035 NA coding downstream 240956 8032385 ~ 8043316 (-)
CI01000054_08021522_08026014 NA coding downstream 258258 8020943 ~ 8026014 (-)
CI01000054_08353876_08358232 NA coding upstream 68774 8353376 ~ 8358232 (-)
CI01000054_08375424_08376756 NA coding upstream 90469 8375071 ~ 8376980 (-)
CI01000054_08400578_08406066 NA coding upstream 115929 8400531 ~ 8406066 (-)
CI01000054_08425960_08439362 NA coding upstream 141341 8425943 ~ 8439430 (-)
CI01000054_08574533_08590975 NA coding upstream 289878 8574480 ~ 8591292 (-)
G234268 NA non-coding downstream 72994 8211070 ~ 8211278 (-)
G234220 NA non-coding downstream 162572 8121178 ~ 8121700 (-)
G234210 NA non-coding downstream 244475 8039399 ~ 8039797 (-)
G234207 NA non-coding downstream 252874 8030895 ~ 8031398 (-)
G234167 NA non-coding downstream 383492 7900538 ~ 7900780 (-)
G234320 NA non-coding upstream 19412 8304014 ~ 8304462 (-)
G234321 NA non-coding upstream 20001 8304603 ~ 8304960 (-)
G234322 NA non-coding upstream 44863 8329465 ~ 8333698 (-)
G234347 NA non-coding upstream 147039 8431641 ~ 8431991 (-)
G234350 NA non-coding upstream 152974 8437576 ~ 8437778 (-)
CI01000054_07165957_07169539 HEYL other downstream 1112599 7165435 ~ 7169539 (-)
CI01000054_06629482_06641861 TRIQK other downstream 1630259 6628082 ~ 6642160 (-)
G232274 NA other downstream 3075032 5206199 ~ 5209240 (-)
CI01000054_04671351_04681181 PEF1 other downstream 3612039 4670151 ~ 4681361 (-)
G231645 NA other downstream 4301449 3981847 ~ 3982823 (-)
G235216 NA other upstream 963437 9248039 ~ 9248538 (-)
CI01000054_09483912_09484282 MRPL36 other upstream 1198545 9483147 ~ 9484282 (-)
CI01000054_09864693_09866871 PPP1R11 other upstream 1578719 9863321 ~ 9867212 (-)
CI01000054_10817235_10819181 TAC1 other upstream 2519269 10816015 ~ 10819362 (-)
CI01000054_10872970_10881017 SDHAF3 other upstream 2586502 10871104 ~ 10881495 (-)

Expression



Co-expression Network