G234320


Basic Information

Item Value
gene id G234320
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 8304014 ~ 8304462 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU265847
GTTCTGGTCGTCTCAGACATCTTCCATTTAAGGATTATGGAGGCCACTGTGCTCTTAGGAACCTTAAGTGCAGCAGAAATTTTTTTGTAACCTTGGCCAGATCTGTGCCTTGCCACAATTCTGTCTCTGAGCCCTTCAGGCAGTTCCTTTGACCTCATGATTCTCATTTGCTCTGACATGCACTGTGAGCTGTAAGGTCTTATATAGACAGGTGTGTGGCTTTCCTAATCAAGTCCAATCAGTATAATCAAACACAGCTGGACTCAAATGAAGGTGTAGAACCATCTCAAGGATGATCAGAAGAAATGGACAGCACCTGAGTTAAATATATGAGTGTCACAGCAAAGGGTCTGAATACTTAGGACCATGTGATATTTCAGTTTTTCTTTTTTAATAAATCTGCAAAAATGTCAACAATTGTGTGTTTTTCTGTCAATATGGGGTGCTGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU265847 True 449 lncRNA 0.41 1 8304014 8304462

Neighbor

gene id symbol gene type direction distance location
CI01000054_08272679_08293481 NA coding downstream 8849 8272519 ~ 8295165 (-)
CI01000054_08228712_08238666 FAM49A, FA49A coding downstream 65348 8228661 ~ 8238666 (-)
CI01000054_08099220_08112291 NA coding downstream 191723 8097675 ~ 8112291 (-)
CI01000054_08091223_08096443 YARS coding downstream 207571 8090597 ~ 8096443 (-)
CI01000054_08032736_08043035 NA coding downstream 260698 8032385 ~ 8043316 (-)
CI01000054_08353876_08358232 NA coding upstream 48914 8353376 ~ 8358232 (-)
CI01000054_08375424_08376756 NA coding upstream 70609 8375071 ~ 8376980 (-)
CI01000054_08400578_08406066 NA coding upstream 96069 8400531 ~ 8406066 (-)
CI01000054_08425960_08439362 NA coding upstream 121481 8425943 ~ 8439430 (-)
CI01000054_08574533_08590975 NA coding upstream 270018 8574480 ~ 8591292 (-)
G234298 NA non-coding downstream 19412 8284272 ~ 8284602 (-)
G234268 NA non-coding downstream 92736 8211070 ~ 8211278 (-)
G234220 NA non-coding downstream 182314 8121178 ~ 8121700 (-)
G234210 NA non-coding downstream 264217 8039399 ~ 8039797 (-)
G234207 NA non-coding downstream 272616 8030895 ~ 8031398 (-)
G234321 NA non-coding upstream 141 8304603 ~ 8304960 (-)
G234322 NA non-coding upstream 25003 8329465 ~ 8333698 (-)
G234347 NA non-coding upstream 127179 8431641 ~ 8431991 (-)
G234350 NA non-coding upstream 133114 8437576 ~ 8437778 (-)
G234351 NA non-coding upstream 134356 8438818 ~ 8439062 (-)
CI01000054_07165957_07169539 HEYL other downstream 1132341 7165435 ~ 7169539 (-)
CI01000054_06629482_06641861 TRIQK other downstream 1650001 6628082 ~ 6642160 (-)
G232274 NA other downstream 3094774 5206199 ~ 5209240 (-)
CI01000054_04671351_04681181 PEF1 other downstream 3631781 4670151 ~ 4681361 (-)
G231645 NA other downstream 4321191 3981847 ~ 3982823 (-)
G235216 NA other upstream 943577 9248039 ~ 9248538 (-)
CI01000054_09483912_09484282 MRPL36 other upstream 1178685 9483147 ~ 9484282 (-)
CI01000054_09864693_09866871 PPP1R11 other upstream 1558859 9863321 ~ 9867212 (-)
CI01000054_10817235_10819181 TAC1 other upstream 2499409 10816015 ~ 10819362 (-)
CI01000054_10872970_10881017 SDHAF3 other upstream 2566642 10871104 ~ 10881495 (-)

Expression


Co-expression Network