G233306


Basic Information

Item Value
gene id G233306
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 8304599 ~ 8304949 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU264744
AGAAAGTCAACCATCACTGCAGCCCTCCACCAGTCGGGGCTTTATGGCAGAGTGGCCCGACGGAAGCCTCTCCTCAGTGCAAGACACATGAAAGCCCGCATGGAGTTTGCTAAAAAACACCTGAAGGACTCCAAGATGGTGAGAAATAAGATTCTCTGGTCTGATGAGACCAAGATAGAACTTTTTGGCCTTAATTCTAAGCGGTATGTGTGGAGAAAACCAGGCACTGCTCCTCACCTGTCCAATACAGTCCCAACAGTGAAGCATGGTGGTGGCAGCATCATGCTGTGGGGGTGTTTTTCAGCTGCAGGGACAGAACGACTGGTTGCAATCGAGGGAAAGATGAATACG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU264744 True 351 TUCP 0.50 1 8304599 8304949

Neighbor

gene id symbol gene type direction distance location
CI01000054_08252231_08263823 NA coding upstream 40647 8252052 ~ 8263952 (+)
CI01000054_08243772_08246444 NA coding upstream 57869 8243772 ~ 8246730 (+)
CI01000054_08196671_08203451 NA coding upstream 100748 8196504 ~ 8203851 (+)
CI01000054_08174433_08193026 TRIT1 coding upstream 111573 8174433 ~ 8193026 (+)
CI01000054_08155292_08167525 NA coding upstream 136819 8155292 ~ 8167780 (+)
CI01000054_08325126_08329621 HPCAL4, VSNL1, VSNL1.S coding downstream 20177 8325126 ~ 8329716 (+)
CI01000054_08336243_08350281 BAG6L coding downstream 31294 8336243 ~ 8350914 (+)
CI01000054_08362528_08374374 ABCF1 coding downstream 57579 8362528 ~ 8374961 (+)
CI01000054_08377415_08378038 NA coding downstream 72176 8377125 ~ 8378689 (+)
CI01000054_08378811_08396034 PPP1R10 coding downstream 73766 8378715 ~ 8396222 (+)
G233305 NA non-coding upstream 151 8304082 ~ 8304448 (+)
G233297 NA non-coding upstream 12790 8291607 ~ 8291809 (+)
G233262 NA non-coding upstream 20046 8284276 ~ 8284553 (+)
G233254 NA non-coding upstream 39081 8264318 ~ 8265518 (+)
G233233 NA non-coding upstream 182899 8121096 ~ 8121700 (+)
G233322 NA non-coding downstream 189295 8494244 ~ 8494479 (+)
G233335 NA non-coding downstream 216769 8521718 ~ 8522154 (+)
G233337 NA non-coding downstream 221885 8526834 ~ 8527577 (+)
G233338 NA non-coding downstream 222928 8527877 ~ 8528174 (+)
G234433 NA non-coding downstream 256648 8561597 ~ 8561807 (+)
G233024 NA other upstream 694706 7567523 ~ 7609893 (+)
G232870 NA other upstream 1416096 6887912 ~ 6888503 (+)
G232659 NA other upstream 1928705 6374850 ~ 6375894 (+)
CI01000054_06305908_06312122 NA other upstream 1997739 6305908 ~ 6312163 (+)
G232558 NA other upstream 2262736 5993660 ~ 6041863 (+)
G235560 NA other downstream 2083187 10388136 ~ 10392378 (+)
CI01000054_11564820_11568338 S100V2 other downstream 3260027 11564820 ~ 11568999 (+)
CI01000054_11633235_11635069 PRF1.8 other downstream 3328027 11632959 ~ 11635103 (+)
CI01000054_11648262_11648786 NA other downstream 3343030 11647959 ~ 11649495 (+)

Expression


Co-expression Network