Gene
RNA
| Item | Value |
|---|---|
| gene id | G234347 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000054 |
| NCBI id | null |
| chromosome length | 13006764 |
| location | 8431641 ~ 8431991 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU265877 | True | 351 | lncRNA | 0.33 | 1 | 8431641 | 8431991 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000054_08400578_08406066 | NA | coding | downstream | 25575 | 8400531 ~ 8406066 (-) |
| CI01000054_08375424_08376756 | NA | coding | downstream | 54661 | 8375071 ~ 8376980 (-) |
| CI01000054_08353876_08358232 | NA | coding | downstream | 73409 | 8353376 ~ 8358232 (-) |
| CI01000054_08272679_08293481 | NA | coding | downstream | 136476 | 8272519 ~ 8295165 (-) |
| CI01000054_08228712_08238666 | FAM49A, FA49A | coding | downstream | 192975 | 8228661 ~ 8238666 (-) |
| CI01000054_08574533_08590975 | NA | coding | upstream | 142489 | 8574480 ~ 8591292 (-) |
| CI01000054_08652832_08667152 | NA | coding | upstream | 220798 | 8652789 ~ 8668929 (-) |
| CI01000054_08692653_08694052 | NA | coding | upstream | 260148 | 8692139 ~ 8694052 (-) |
| CI01000054_08710955_08718087 | HDAC1, HDAC2.S, HDAC2, HDAC1.S | coding | upstream | 278796 | 8710787 ~ 8718087 (-) |
| CI01000054_08721571_08723333 | NA | coding | upstream | 289017 | 8721008 ~ 8724208 (-) |
| G234322 | NA | non-coding | downstream | 97943 | 8329465 ~ 8333698 (-) |
| G234321 | NA | non-coding | downstream | 126681 | 8304603 ~ 8304960 (-) |
| G234320 | NA | non-coding | downstream | 127179 | 8304014 ~ 8304462 (-) |
| G234298 | NA | non-coding | downstream | 147039 | 8284272 ~ 8284602 (-) |
| G234268 | NA | non-coding | downstream | 220363 | 8211070 ~ 8211278 (-) |
| G234350 | NA | non-coding | upstream | 5585 | 8437576 ~ 8437778 (-) |
| G234351 | NA | non-coding | upstream | 6827 | 8438818 ~ 8439062 (-) |
| G234352 | NA | non-coding | upstream | 7686 | 8439677 ~ 8439959 (-) |
| G234353 | NA | non-coding | upstream | 8993 | 8440984 ~ 8441202 (-) |
| G234354 | NA | non-coding | upstream | 9479 | 8441470 ~ 8441704 (-) |
| CI01000054_07165957_07169539 | HEYL | other | downstream | 1259968 | 7165435 ~ 7169539 (-) |
| CI01000054_06629482_06641861 | TRIQK | other | downstream | 1777628 | 6628082 ~ 6642160 (-) |
| G232274 | NA | other | downstream | 3222401 | 5206199 ~ 5209240 (-) |
| CI01000054_04671351_04681181 | PEF1 | other | downstream | 3759408 | 4670151 ~ 4681361 (-) |
| G231645 | NA | other | downstream | 4448818 | 3981847 ~ 3982823 (-) |
| G235216 | NA | other | upstream | 816048 | 9248039 ~ 9248538 (-) |
| CI01000054_09483912_09484282 | MRPL36 | other | upstream | 1051156 | 9483147 ~ 9484282 (-) |
| CI01000054_09864693_09866871 | PPP1R11 | other | upstream | 1431330 | 9863321 ~ 9867212 (-) |
| CI01000054_10817235_10819181 | TAC1 | other | upstream | 2371880 | 10816015 ~ 10819362 (-) |
| CI01000054_10872970_10881017 | SDHAF3 | other | upstream | 2439113 | 10871104 ~ 10881495 (-) |
