Gene
RNA
| Item | Value |
|---|---|
| gene id | G234391 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000054 |
| NCBI id | null |
| chromosome length | 13006764 |
| location | 8501301 ~ 8501529 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU265922 | True | 229 | lncRNA | 0.42 | 1 | 8501301 | 8501529 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000054_08425960_08439362 | NA | coding | downstream | 61871 | 8425943 ~ 8439430 (-) |
| CI01000054_08400578_08406066 | NA | coding | downstream | 95235 | 8400531 ~ 8406066 (-) |
| CI01000054_08375424_08376756 | NA | coding | downstream | 124321 | 8375071 ~ 8376980 (-) |
| CI01000054_08353876_08358232 | NA | coding | downstream | 143069 | 8353376 ~ 8358232 (-) |
| CI01000054_08272679_08293481 | NA | coding | downstream | 206136 | 8272519 ~ 8295165 (-) |
| CI01000054_08574533_08590975 | NA | coding | upstream | 72951 | 8574480 ~ 8591292 (-) |
| CI01000054_08652832_08667152 | NA | coding | upstream | 151260 | 8652789 ~ 8668929 (-) |
| CI01000054_08692653_08694052 | NA | coding | upstream | 190610 | 8692139 ~ 8694052 (-) |
| CI01000054_08710955_08718087 | HDAC1, HDAC2.S, HDAC2, HDAC1.S | coding | upstream | 209258 | 8710787 ~ 8718087 (-) |
| CI01000054_08721571_08723333 | NA | coding | upstream | 219479 | 8721008 ~ 8724208 (-) |
| G234388 | NA | non-coding | downstream | 3171 | 8497906 ~ 8498130 (-) |
| G234375 | NA | non-coding | downstream | 10184 | 8489790 ~ 8491117 (-) |
| G234385 | NA | non-coding | downstream | 14147 | 8486944 ~ 8487154 (-) |
| G234383 | NA | non-coding | downstream | 15400 | 8485682 ~ 8485901 (-) |
| G234378 | NA | non-coding | downstream | 24346 | 8476733 ~ 8476955 (-) |
| G234393 | NA | non-coding | upstream | 2508 | 8504037 ~ 8504273 (-) |
| G234405 | NA | non-coding | upstream | 25325 | 8526854 ~ 8527113 (-) |
| G234410 | NA | non-coding | upstream | 41507 | 8543036 ~ 8543243 (-) |
| G234424 | NA | non-coding | upstream | 52855 | 8554384 ~ 8554583 (-) |
| G234899 | NA | non-coding | upstream | 70907 | 8572436 ~ 8572678 (-) |
| CI01000054_07165957_07169539 | HEYL | other | downstream | 1329628 | 7165435 ~ 7169539 (-) |
| CI01000054_06629482_06641861 | TRIQK | other | downstream | 1847288 | 6628082 ~ 6642160 (-) |
| G232274 | NA | other | downstream | 3292061 | 5206199 ~ 5209240 (-) |
| CI01000054_04671351_04681181 | PEF1 | other | downstream | 3829068 | 4670151 ~ 4681361 (-) |
| G231645 | NA | other | downstream | 4518478 | 3981847 ~ 3982823 (-) |
| G235216 | NA | other | upstream | 746510 | 9248039 ~ 9248538 (-) |
| CI01000054_09483912_09484282 | MRPL36 | other | upstream | 981618 | 9483147 ~ 9484282 (-) |
| CI01000054_09864693_09866871 | PPP1R11 | other | upstream | 1361792 | 9863321 ~ 9867212 (-) |
| CI01000054_10817235_10819181 | TAC1 | other | upstream | 2302342 | 10816015 ~ 10819362 (-) |
| CI01000054_10872970_10881017 | SDHAF3 | other | upstream | 2369575 | 10871104 ~ 10881495 (-) |
