Gene
RNA
| Item | Value |
|---|---|
| gene id | G233335 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000054 |
| NCBI id | null |
| chromosome length | 13006764 |
| location | 8521718 ~ 8522154 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU264774 | True | 437 | lncRNA | 0.41 | 1 | 8521718 | 8522154 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000054_08485645_08496381 | NA | coding | upstream | 24853 | 8485428 ~ 8496865 (+) |
| CI01000054_08419492_08424760 | KHDRBS1 | coding | upstream | 96797 | 8418619 ~ 8424921 (+) |
| CI01000054_08378811_08396034 | PPP1R10 | coding | upstream | 125496 | 8378715 ~ 8396222 (+) |
| CI01000054_08377415_08378038 | NA | coding | upstream | 143029 | 8377125 ~ 8378689 (+) |
| CI01000054_08362528_08374374 | ABCF1 | coding | upstream | 146757 | 8362528 ~ 8374961 (+) |
| CI01000054_08675009_08686170 | KPNA6 | coding | downstream | 152855 | 8675009 ~ 8686679 (+) |
| CI01000054_08695322_08702750 | TXLNA | coding | downstream | 173168 | 8695322 ~ 8703309 (+) |
| CI01000054_08704697_08709175 | EIF3I | coding | downstream | 182543 | 8704697 ~ 8709349 (+) |
| CI01000054_08725294_08727378 | NA | coding | downstream | 203010 | 8725164 ~ 8727830 (+) |
| CI01000054_08771624_08790335 | NA | coding | downstream | 249407 | 8771561 ~ 8790922 (+) |
| G233322 | NA | non-coding | upstream | 27239 | 8494244 ~ 8494479 (+) |
| G233305 | NA | non-coding | upstream | 217270 | 8304082 ~ 8304448 (+) |
| G233297 | NA | non-coding | upstream | 229909 | 8291607 ~ 8291809 (+) |
| G233262 | NA | non-coding | upstream | 237165 | 8284276 ~ 8284553 (+) |
| G233254 | NA | non-coding | upstream | 256200 | 8264318 ~ 8265518 (+) |
| G233337 | NA | non-coding | downstream | 4680 | 8526834 ~ 8527577 (+) |
| G233338 | NA | non-coding | downstream | 5723 | 8527877 ~ 8528174 (+) |
| G234433 | NA | non-coding | downstream | 39443 | 8561597 ~ 8561807 (+) |
| G234452 | NA | non-coding | downstream | 50731 | 8572885 ~ 8573093 (+) |
| G234482 | NA | non-coding | downstream | 75816 | 8597970 ~ 8598177 (+) |
| CI01000054_08325126_08329621 | HPCAL4, VSNL1, VSNL1.S | other | upstream | 192130 | 8325126 ~ 8329716 (+) |
| G233306 | NA | other | upstream | 216769 | 8304599 ~ 8304949 (+) |
| G233024 | NA | other | upstream | 911825 | 7567523 ~ 7609893 (+) |
| G232870 | NA | other | upstream | 1633215 | 6887912 ~ 6888503 (+) |
| G232659 | NA | other | upstream | 2145824 | 6374850 ~ 6375894 (+) |
| G235560 | NA | other | downstream | 1865982 | 10388136 ~ 10392378 (+) |
| CI01000054_11564820_11568338 | S100V2 | other | downstream | 3042822 | 11564820 ~ 11568999 (+) |
| CI01000054_11633235_11635069 | PRF1.8 | other | downstream | 3110822 | 11632959 ~ 11635103 (+) |
| CI01000054_11648262_11648786 | NA | other | downstream | 3125825 | 11647959 ~ 11649495 (+) |
| G236874 | NA | other | downstream | 3291534 | 11813688 ~ 11816475 (+) |
