G234482


Basic Information

Item Value
gene id G234482
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 8597970 ~ 8598177 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU266016
GGATTGTTTTTTAGCAGGGTTCATTGCTATGGTAACTTATGCTTCACGGCTAACCTGCTCCGGAGCAGGTTTTATTCTGAGTTAGATCACAAACCCAAACTCGACCAATCAGCTGTGAGTAAAGTGACATGTATCTGATGCAATAAAGCCACTCCCCCTGTATCTCTCGCTCCAAATTAAATCAGTTTATAGTGAAAACATTTTAGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU266016 True 208 lncRNA 0.41 1 8597970 8598177

Neighbor

gene id symbol gene type direction distance location
CI01000054_08485645_08496381 NA coding upstream 101105 8485428 ~ 8496865 (+)
CI01000054_08419492_08424760 KHDRBS1 coding upstream 173049 8418619 ~ 8424921 (+)
CI01000054_08378811_08396034 PPP1R10 coding upstream 201748 8378715 ~ 8396222 (+)
CI01000054_08377415_08378038 NA coding upstream 219281 8377125 ~ 8378689 (+)
CI01000054_08362528_08374374 ABCF1 coding upstream 223009 8362528 ~ 8374961 (+)
CI01000054_08675009_08686170 KPNA6 coding downstream 76832 8675009 ~ 8686679 (+)
CI01000054_08695322_08702750 TXLNA coding downstream 97145 8695322 ~ 8703309 (+)
CI01000054_08704697_08709175 EIF3I coding downstream 106520 8704697 ~ 8709349 (+)
CI01000054_08725294_08727378 NA coding downstream 126987 8725164 ~ 8727830 (+)
CI01000054_08771624_08790335 NA coding downstream 173384 8771561 ~ 8790922 (+)
G234452 NA non-coding upstream 24877 8572885 ~ 8573093 (+)
G234433 NA non-coding upstream 36163 8561597 ~ 8561807 (+)
G233338 NA non-coding upstream 69796 8527877 ~ 8528174 (+)
G233337 NA non-coding upstream 70393 8526834 ~ 8527577 (+)
G233335 NA non-coding upstream 75816 8521718 ~ 8522154 (+)
G234490 NA non-coding downstream 21765 8619942 ~ 8620228 (+)
G234495 NA non-coding downstream 38759 8636936 ~ 8637164 (+)
G234536 NA non-coding downstream 174644 8772821 ~ 8773027 (+)
G234541 NA non-coding downstream 179984 8778161 ~ 8778376 (+)
G234543 NA non-coding downstream 181144 8779321 ~ 8779587 (+)
CI01000054_08325126_08329621 HPCAL4, VSNL1, VSNL1.S other upstream 268382 8325126 ~ 8329716 (+)
G233306 NA other upstream 293021 8304599 ~ 8304949 (+)
G233024 NA other upstream 988077 7567523 ~ 7609893 (+)
G232870 NA other upstream 1709467 6887912 ~ 6888503 (+)
G232659 NA other upstream 2222076 6374850 ~ 6375894 (+)
G235560 NA other downstream 1789959 10388136 ~ 10392378 (+)
CI01000054_11564820_11568338 S100V2 other downstream 2966799 11564820 ~ 11568999 (+)
CI01000054_11633235_11635069 PRF1.8 other downstream 3034799 11632959 ~ 11635103 (+)
CI01000054_11648262_11648786 NA other downstream 3049802 11647959 ~ 11649495 (+)
G236874 NA other downstream 3215511 11813688 ~ 11816475 (+)

Expression


Co-expression Network