Gene
RNA
| Item | Value |
|---|---|
| gene id | G234911 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000054 |
| NCBI id | null |
| chromosome length | 13006764 |
| location | 8598104 ~ 8598399 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU266473 | True | 296 | lncRNA | 0.23 | 1 | 8598104 | 8598399 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000054_08574533_08590975 | NA | coding | downstream | 6812 | 8574480 ~ 8591292 (-) |
| CI01000054_08425960_08439362 | NA | coding | downstream | 158674 | 8425943 ~ 8439430 (-) |
| CI01000054_08400578_08406066 | NA | coding | downstream | 192038 | 8400531 ~ 8406066 (-) |
| CI01000054_08375424_08376756 | NA | coding | downstream | 221124 | 8375071 ~ 8376980 (-) |
| CI01000054_08353876_08358232 | NA | coding | downstream | 239872 | 8353376 ~ 8358232 (-) |
| CI01000054_08652832_08667152 | NA | coding | upstream | 54390 | 8652789 ~ 8668929 (-) |
| CI01000054_08692653_08694052 | NA | coding | upstream | 93740 | 8692139 ~ 8694052 (-) |
| CI01000054_08710955_08718087 | HDAC1, HDAC2.S, HDAC2, HDAC1.S | coding | upstream | 112388 | 8710787 ~ 8718087 (-) |
| CI01000054_08721571_08723333 | NA | coding | upstream | 122609 | 8721008 ~ 8724208 (-) |
| CI01000054_08937312_08942587 | LDLRAP1, LDLRAP1A | coding | upstream | 338913 | 8937312 ~ 8942587 (-) |
| G234899 | NA | non-coding | downstream | 25426 | 8572436 ~ 8572678 (-) |
| G234424 | NA | non-coding | downstream | 43521 | 8554384 ~ 8554583 (-) |
| G234410 | NA | non-coding | downstream | 54861 | 8543036 ~ 8543243 (-) |
| G234405 | NA | non-coding | downstream | 70991 | 8526854 ~ 8527113 (-) |
| G234393 | NA | non-coding | downstream | 93831 | 8504037 ~ 8504273 (-) |
| G234926 | NA | non-coding | upstream | 42142 | 8640541 ~ 8641175 (-) |
| G234935 | NA | non-coding | upstream | 91912 | 8690311 ~ 8690595 (-) |
| G234936 | NA | non-coding | upstream | 107355 | 8705754 ~ 8706067 (-) |
| CI01000054_07165957_07169539 | HEYL | other | downstream | 1426431 | 7165435 ~ 7169539 (-) |
| CI01000054_06629482_06641861 | TRIQK | other | downstream | 1944091 | 6628082 ~ 6642160 (-) |
| G232274 | NA | other | downstream | 3388864 | 5206199 ~ 5209240 (-) |
| CI01000054_04671351_04681181 | PEF1 | other | downstream | 3925871 | 4670151 ~ 4681361 (-) |
| G231645 | NA | other | downstream | 4615281 | 3981847 ~ 3982823 (-) |
| G235216 | NA | other | upstream | 649640 | 9248039 ~ 9248538 (-) |
| CI01000054_09483912_09484282 | MRPL36 | other | upstream | 884748 | 9483147 ~ 9484282 (-) |
| CI01000054_09864693_09866871 | PPP1R11 | other | upstream | 1264922 | 9863321 ~ 9867212 (-) |
| CI01000054_10817235_10819181 | TAC1 | other | upstream | 2205472 | 10816015 ~ 10819362 (-) |
| CI01000054_10872970_10881017 | SDHAF3 | other | upstream | 2272705 | 10871104 ~ 10881495 (-) |
