G234926


Basic Information

Item Value
gene id G234926
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 8640541 ~ 8641175 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU266488
ATAACGACATGAGGGTGAGTAATAAATGACATTATTTTCATTTTTGGGTGAACTAACCCTCTAAAATACAAATTAATAAAAACTATATAGACATATTTAAAAACTATTTATTCAGGAATTATTGGATATTGGATATTTTTCTCTTGAACGCAAGCACCAAGTCATTTTAGTGACACTTTTATGGCACATTTGCATCCTTTTAGAAGCTTAAGAGTCCTGGTCAATGTATTTAAACTGCATGAAAAAGAGCTACCAGCATATTTCTTCAAAATTCTCTTGTTTCATATGTAGTAATATGGGTTTAACTTTACAGTAACATAGGTAAATGATTTTCATTTCTGGGTGAACTGTTCCTTAAAGCTGCAGTCCGTAAGTTTTGCCTCTTTGTCGCCATCTCTGTTTGAAACCTGCAATTGCAGTTGTTTGCAGAATTATTATCTTTACGTGGGTTGTGCATCGGCACGGCTCCTCAGCGCAGATGAATCTAATGTTTGCTGTCAGTCACCACATCGGTGTGGATACTGTACTTCGAAATCACAGATTCTACGTCTTGGAAGTATGACCAAAATAAGAATTTTCACAAGAAAATGTCATCTGAACAAGTAAGTAACATGTCTGGCACTTTTGTTCTGACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU266488 True 635 lncRNA 0.35 1 8640541 8641175

Neighbor

gene id symbol gene type direction distance location
CI01000054_08574533_08590975 NA coding downstream 49249 8574480 ~ 8591292 (-)
CI01000054_08425960_08439362 NA coding downstream 201111 8425943 ~ 8439430 (-)
CI01000054_08400578_08406066 NA coding downstream 234475 8400531 ~ 8406066 (-)
CI01000054_08375424_08376756 NA coding downstream 263561 8375071 ~ 8376980 (-)
CI01000054_08353876_08358232 NA coding downstream 282309 8353376 ~ 8358232 (-)
CI01000054_08652832_08667152 NA coding upstream 11614 8652789 ~ 8668929 (-)
CI01000054_08692653_08694052 NA coding upstream 50964 8692139 ~ 8694052 (-)
CI01000054_08710955_08718087 HDAC1, HDAC2.S, HDAC2, HDAC1.S coding upstream 69612 8710787 ~ 8718087 (-)
CI01000054_08721571_08723333 NA coding upstream 79833 8721008 ~ 8724208 (-)
CI01000054_08937312_08942587 LDLRAP1, LDLRAP1A coding upstream 296137 8937312 ~ 8942587 (-)
G234911 NA non-coding downstream 42142 8598104 ~ 8598399 (-)
G234899 NA non-coding downstream 67863 8572436 ~ 8572678 (-)
G234424 NA non-coding downstream 85958 8554384 ~ 8554583 (-)
G234410 NA non-coding downstream 97298 8543036 ~ 8543243 (-)
G234405 NA non-coding downstream 113428 8526854 ~ 8527113 (-)
G234935 NA non-coding upstream 49136 8690311 ~ 8690595 (-)
G234936 NA non-coding upstream 64579 8705754 ~ 8706067 (-)
G234946 NA non-coding upstream 92236 8733411 ~ 8733740 (-)
CI01000054_07165957_07169539 HEYL other downstream 1468868 7165435 ~ 7169539 (-)
CI01000054_06629482_06641861 TRIQK other downstream 1986528 6628082 ~ 6642160 (-)
G232274 NA other downstream 3431301 5206199 ~ 5209240 (-)
CI01000054_04671351_04681181 PEF1 other downstream 3968308 4670151 ~ 4681361 (-)
G231645 NA other downstream 4657718 3981847 ~ 3982823 (-)
G235216 NA other upstream 606864 9248039 ~ 9248538 (-)
CI01000054_09483912_09484282 MRPL36 other upstream 841972 9483147 ~ 9484282 (-)
CI01000054_09864693_09866871 PPP1R11 other upstream 1222146 9863321 ~ 9867212 (-)
CI01000054_10817235_10819181 TAC1 other upstream 2162696 10816015 ~ 10819362 (-)
CI01000054_10872970_10881017 SDHAF3 other upstream 2229929 10871104 ~ 10881495 (-)

Expression


Co-expression Network