G234936


Basic Information

Item Value
gene id G234936
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 8705754 ~ 8706067 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU266498
AATAGATTGAAAAAAAAAAGGCTGAAACTGAGAAAATTTAGAATAGTTTAGTAATAATAACAATAATTATAACAATAGTAATAATAATTATTATAATTATAAGCCACTGCAAAAAAAAGTATGCAGGTGGTGTGACAGTCTCCAGAGATTCTAAAAAACAAAACAAAAAAAATGAAAAAACAAAACATTAAAAGGCTAAAATTATTGACAAAAATTTCAATTGTTTTAAATAATAATAAACTGCCATTGTTTTAAAATGTTAATATTAAAAAAAAATGTGGTAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU266498 True 286 lncRNA 0.21 2 8705754 8706067

Neighbor

gene id symbol gene type direction distance location
CI01000054_08692653_08694052 NA coding downstream 11702 8692139 ~ 8694052 (-)
CI01000054_08652832_08667152 NA coding downstream 36825 8652789 ~ 8668929 (-)
CI01000054_08574533_08590975 NA coding downstream 114462 8574480 ~ 8591292 (-)
CI01000054_08425960_08439362 NA coding downstream 266324 8425943 ~ 8439430 (-)
CI01000054_08400578_08406066 NA coding downstream 299688 8400531 ~ 8406066 (-)
CI01000054_08710955_08718087 HDAC1, HDAC2.S, HDAC2, HDAC1.S coding upstream 4720 8710787 ~ 8718087 (-)
CI01000054_08721571_08723333 NA coding upstream 14941 8721008 ~ 8724208 (-)
CI01000054_08937312_08942587 LDLRAP1, LDLRAP1A coding upstream 231245 8937312 ~ 8942587 (-)
CI01000054_08953766_08966617 TMEM57, TMEM57A coding upstream 246067 8952134 ~ 8966617 (-)
CI01000054_09077309_09080163 NA coding upstream 370764 9076831 ~ 9080812 (-)
G234935 NA non-coding downstream 15159 8690311 ~ 8690595 (-)
G234926 NA non-coding downstream 64579 8640541 ~ 8641175 (-)
G234911 NA non-coding downstream 107355 8598104 ~ 8598399 (-)
G234899 NA non-coding downstream 133076 8572436 ~ 8572678 (-)
G234946 NA non-coding upstream 27344 8733411 ~ 8733740 (-)
G234969 NA non-coding upstream 60378 8766445 ~ 8766674 (-)
G234982 NA non-coding upstream 90122 8796189 ~ 8796582 (-)
G235016 NA non-coding upstream 132549 8838616 ~ 8838853 (-)
CI01000054_07165957_07169539 HEYL other downstream 1534081 7165435 ~ 7169539 (-)
CI01000054_06629482_06641861 TRIQK other downstream 2051741 6628082 ~ 6642160 (-)
G232274 NA other downstream 3496514 5206199 ~ 5209240 (-)
CI01000054_04671351_04681181 PEF1 other downstream 4033521 4670151 ~ 4681361 (-)
G231645 NA other downstream 4722931 3981847 ~ 3982823 (-)
G235216 NA other upstream 541972 9248039 ~ 9248538 (-)
CI01000054_09483912_09484282 MRPL36 other upstream 777080 9483147 ~ 9484282 (-)
CI01000054_09864693_09866871 PPP1R11 other upstream 1157254 9863321 ~ 9867212 (-)
CI01000054_10817235_10819181 TAC1 other upstream 2097804 10816015 ~ 10819362 (-)
CI01000054_10872970_10881017 SDHAF3 other upstream 2165037 10871104 ~ 10881495 (-)

Expression


Co-expression Network