G234536


Basic Information

Item Value
gene id G234536
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 8772821 ~ 8773027 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU266071
GTCAAAATCCCTTTAAGATAAGTCATTTCACTTGGCGGCCATCTTTGAAACGCCTCTCGGGCATCCAAGTGCAGCTCCTATCTCTTTGAATGGGGAAACATCAAATTCTCCAAAGCTGTTTGCCAAGCTTTCGATTAAATTTCATATTTGAAATCACCAATGAAATCTGATAACAACTGTCTCATAAATTTTGTTTCTAAACGCTCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU266071 True 207 lncRNA 0.39 1 8772821 8773027

Neighbor

gene id symbol gene type direction distance location
CI01000054_08725294_08727378 NA coding upstream 44991 8725164 ~ 8727830 (+)
CI01000054_08704697_08709175 EIF3I coding upstream 63472 8704697 ~ 8709349 (+)
CI01000054_08695322_08702750 TXLNA coding upstream 69512 8695322 ~ 8703309 (+)
CI01000054_08675009_08686170 KPNA6 coding upstream 86142 8675009 ~ 8686679 (+)
CI01000054_08485645_08496381 NA coding upstream 275956 8485428 ~ 8496865 (+)
CI01000054_08908112_08917294 FNDC5B, FNDC5, FNDC5A coding downstream 135085 8908112 ~ 8917595 (+)
CI01000054_08969979_08973590 NA coding downstream 196952 8969979 ~ 8973666 (+)
CI01000054_08975450_08984634 E2F3 coding downstream 202332 8975359 ~ 8985175 (+)
CI01000054_09151300_09164780 NA coding downstream 377758 9150785 ~ 9164938 (+)
CI01000054_09232327_09233391 SOX4A, SOX4 coding downstream 458972 9231999 ~ 9234242 (+)
G234495 NA non-coding upstream 135657 8636936 ~ 8637164 (+)
G234490 NA non-coding upstream 152593 8619942 ~ 8620228 (+)
G234482 NA non-coding upstream 174644 8597970 ~ 8598177 (+)
G234452 NA non-coding upstream 199728 8572885 ~ 8573093 (+)
G234433 NA non-coding upstream 211014 8561597 ~ 8561807 (+)
G234541 NA non-coding downstream 5134 8778161 ~ 8778376 (+)
G234543 NA non-coding downstream 6294 8779321 ~ 8779587 (+)
G234577 NA non-coding downstream 48707 8821734 ~ 8822062 (+)
G234602 NA non-coding downstream 107322 8880349 ~ 8880654 (+)
G234606 NA non-coding downstream 159346 8932373 ~ 8932635 (+)
CI01000054_08325126_08329621 HPCAL4, VSNL1, VSNL1.S other upstream 443233 8325126 ~ 8329716 (+)
G233306 NA other upstream 467872 8304599 ~ 8304949 (+)
G233024 NA other upstream 1162928 7567523 ~ 7609893 (+)
G232870 NA other upstream 1884318 6887912 ~ 6888503 (+)
G232659 NA other upstream 2396927 6374850 ~ 6375894 (+)
G235560 NA other downstream 1615109 10388136 ~ 10392378 (+)
CI01000054_11564820_11568338 S100V2 other downstream 2791949 11564820 ~ 11568999 (+)
CI01000054_11633235_11635069 PRF1.8 other downstream 2859949 11632959 ~ 11635103 (+)
CI01000054_11648262_11648786 NA other downstream 2874952 11647959 ~ 11649495 (+)
G236874 NA other downstream 3040661 11813688 ~ 11816475 (+)

Expression


Co-expression Network