Gene
RNA
| Item | Value |
|---|---|
| gene id | G235041 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000054 |
| NCBI id | null |
| chromosome length | 13006764 |
| location | 8863172 ~ 8863503 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU266603 | True | 332 | lncRNA | 0.39 | 1 | 8863172 | 8863503 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000054_08721571_08723333 | NA | coding | downstream | 139090 | 8721008 ~ 8724208 (-) |
| CI01000054_08710955_08718087 | HDAC1, HDAC2.S, HDAC2, HDAC1.S | coding | downstream | 145085 | 8710787 ~ 8718087 (-) |
| CI01000054_08692653_08694052 | NA | coding | downstream | 169120 | 8692139 ~ 8694052 (-) |
| CI01000054_08652832_08667152 | NA | coding | downstream | 194243 | 8652789 ~ 8668929 (-) |
| CI01000054_08574533_08590975 | NA | coding | downstream | 271880 | 8574480 ~ 8591292 (-) |
| CI01000054_08937312_08942587 | LDLRAP1, LDLRAP1A | coding | upstream | 73809 | 8937312 ~ 8942587 (-) |
| CI01000054_08953766_08966617 | TMEM57, TMEM57A | coding | upstream | 88631 | 8952134 ~ 8966617 (-) |
| CI01000054_09077309_09080163 | NA | coding | upstream | 213328 | 9076831 ~ 9080812 (-) |
| CI01000054_09218869_09223868 | NA | coding | upstream | 355129 | 9218632 ~ 9224119 (-) |
| CI01000054_09453616_09482480 | LPCAT1 | coding | upstream | 588606 | 9452109 ~ 9482723 (-) |
| G235026 | NA | non-coding | downstream | 14538 | 8848284 ~ 8848634 (-) |
| G235016 | NA | non-coding | downstream | 24319 | 8838616 ~ 8838853 (-) |
| G234982 | NA | non-coding | downstream | 66590 | 8796189 ~ 8796582 (-) |
| G234969 | NA | non-coding | downstream | 96498 | 8766445 ~ 8766674 (-) |
| G234946 | NA | non-coding | downstream | 129432 | 8733411 ~ 8733740 (-) |
| G235049 | NA | non-coding | upstream | 11769 | 8875272 ~ 8875540 (-) |
| G235060 | NA | non-coding | upstream | 30653 | 8894156 ~ 8894595 (-) |
| G235061 | NA | non-coding | upstream | 31470 | 8894973 ~ 8895537 (-) |
| G235064 | NA | non-coding | upstream | 34385 | 8897888 ~ 8912476 (-) |
| G235084 | NA | non-coding | upstream | 110510 | 8974013 ~ 8974310 (-) |
| CI01000054_07165957_07169539 | HEYL | other | downstream | 1691499 | 7165435 ~ 7169539 (-) |
| CI01000054_06629482_06641861 | TRIQK | other | downstream | 2209159 | 6628082 ~ 6642160 (-) |
| G232274 | NA | other | downstream | 3653932 | 5206199 ~ 5209240 (-) |
| CI01000054_04671351_04681181 | PEF1 | other | downstream | 4190939 | 4670151 ~ 4681361 (-) |
| G231645 | NA | other | downstream | 4880349 | 3981847 ~ 3982823 (-) |
| G235216 | NA | other | upstream | 384536 | 9248039 ~ 9248538 (-) |
| CI01000054_09483912_09484282 | MRPL36 | other | upstream | 619644 | 9483147 ~ 9484282 (-) |
| CI01000054_09864693_09866871 | PPP1R11 | other | upstream | 999818 | 9863321 ~ 9867212 (-) |
| CI01000054_10817235_10819181 | TAC1 | other | upstream | 1940368 | 10816015 ~ 10819362 (-) |
| CI01000054_10872970_10881017 | SDHAF3 | other | upstream | 2007601 | 10871104 ~ 10881495 (-) |
