G234602


Basic Information

Item Value
gene id G234602
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 8880349 ~ 8880654 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU266140
CTTTCAACAAGGTTTCTTTGCGAAACACGAATTACACTCTGCCTCGTTTACAAAACAATCAGCTGTCAAATGCTCCAAACAAACATATAATCCTCCAAGTCTGATGCGATCCGGGACGCCATTAAAAATAAATTATGCACTTGTTCCTGACGCGGGTGTCCTTTTTAAGTCGAATCGTCAAAGCGAACGTTGGAGTAGCCTATGTCAGAAACTAAACAGGCATCTGTATACTGTATCCAGTGTAGACAGCGTTAGTGATTATAACTGCTTTATTTGCTTTTGACGAGACGCAACGCTCGCATCTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU266140 True 306 lncRNA 0.42 1 8880349 8880654

Neighbor

gene id symbol gene type direction distance location
CI01000054_08771624_08790335 NA coding upstream 89427 8771561 ~ 8790922 (+)
CI01000054_08725294_08727378 NA coding upstream 152519 8725164 ~ 8727830 (+)
CI01000054_08704697_08709175 EIF3I coding upstream 171000 8704697 ~ 8709349 (+)
CI01000054_08695322_08702750 TXLNA coding upstream 177040 8695322 ~ 8703309 (+)
CI01000054_08675009_08686170 KPNA6 coding upstream 193670 8675009 ~ 8686679 (+)
CI01000054_08908112_08917294 FNDC5B, FNDC5, FNDC5A coding downstream 27458 8908112 ~ 8917595 (+)
CI01000054_08969979_08973590 NA coding downstream 89325 8969979 ~ 8973666 (+)
CI01000054_08975450_08984634 E2F3 coding downstream 94705 8975359 ~ 8985175 (+)
CI01000054_09151300_09164780 NA coding downstream 270131 9150785 ~ 9164938 (+)
CI01000054_09232327_09233391 SOX4A, SOX4 coding downstream 351345 9231999 ~ 9234242 (+)
G234577 NA non-coding upstream 58287 8821734 ~ 8822062 (+)
G234543 NA non-coding upstream 100762 8779321 ~ 8779587 (+)
G234541 NA non-coding upstream 101973 8778161 ~ 8778376 (+)
G234536 NA non-coding upstream 107322 8772821 ~ 8773027 (+)
G234495 NA non-coding upstream 243185 8636936 ~ 8637164 (+)
G234606 NA non-coding downstream 51719 8932373 ~ 8932635 (+)
G234588 NA non-coding downstream 93355 8974009 ~ 8974677 (+)
G234636 NA non-coding downstream 186924 9067578 ~ 9067907 (+)
G234641 NA non-coding downstream 195054 9075708 ~ 9075917 (+)
G234643 NA non-coding downstream 195918 9076572 ~ 9076797 (+)
CI01000054_08325126_08329621 HPCAL4, VSNL1, VSNL1.S other upstream 550761 8325126 ~ 8329716 (+)
G233306 NA other upstream 575400 8304599 ~ 8304949 (+)
G233024 NA other upstream 1270456 7567523 ~ 7609893 (+)
G232870 NA other upstream 1991846 6887912 ~ 6888503 (+)
G232659 NA other upstream 2504455 6374850 ~ 6375894 (+)
G235560 NA other downstream 1507482 10388136 ~ 10392378 (+)
CI01000054_11564820_11568338 S100V2 other downstream 2684322 11564820 ~ 11568999 (+)
CI01000054_11633235_11635069 PRF1.8 other downstream 2752322 11632959 ~ 11635103 (+)
CI01000054_11648262_11648786 NA other downstream 2767325 11647959 ~ 11649495 (+)
G236874 NA other downstream 2933034 11813688 ~ 11816475 (+)

Expression


Co-expression Network