Gene
RNA
| Item | Value |
|---|---|
| gene id | G235084 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000054 |
| NCBI id | null |
| chromosome length | 13006764 |
| location | 8974013 ~ 8974310 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU266649 | True | 298 | lncRNA | 0.35 | 1 | 8974013 | 8974310 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000054_08953766_08966617 | TMEM57, TMEM57A | coding | downstream | 7396 | 8952134 ~ 8966617 (-) |
| CI01000054_08937312_08942587 | LDLRAP1, LDLRAP1A | coding | downstream | 31426 | 8937312 ~ 8942587 (-) |
| CI01000054_08721571_08723333 | NA | coding | downstream | 249931 | 8721008 ~ 8724208 (-) |
| CI01000054_08710955_08718087 | HDAC1, HDAC2.S, HDAC2, HDAC1.S | coding | downstream | 255926 | 8710787 ~ 8718087 (-) |
| CI01000054_08692653_08694052 | NA | coding | downstream | 279961 | 8692139 ~ 8694052 (-) |
| CI01000054_09077309_09080163 | NA | coding | upstream | 102521 | 9076831 ~ 9080812 (-) |
| CI01000054_09218869_09223868 | NA | coding | upstream | 244322 | 9218632 ~ 9224119 (-) |
| CI01000054_09453616_09482480 | LPCAT1 | coding | upstream | 477799 | 9452109 ~ 9482723 (-) |
| CI01000054_09483912_09484282 | MRPL36 | coding | upstream | 509502 | 9483147 ~ 9484282 (-) |
| CI01000054_09488559_09488870 | NA | coding | upstream | 513966 | 9488276 ~ 9488870 (-) |
| G235064 | NA | non-coding | downstream | 61537 | 8897888 ~ 8912476 (-) |
| G235061 | NA | non-coding | downstream | 78476 | 8894973 ~ 8895537 (-) |
| G235060 | NA | non-coding | downstream | 79418 | 8894156 ~ 8894595 (-) |
| G235049 | NA | non-coding | downstream | 98473 | 8875272 ~ 8875540 (-) |
| G235041 | NA | non-coding | downstream | 110510 | 8863172 ~ 8863503 (-) |
| G235080 | NA | non-coding | upstream | 83 | 8974393 ~ 8974682 (-) |
| G235096 | NA | non-coding | upstream | 12791 | 8987101 ~ 8987407 (-) |
| G235097 | NA | non-coding | upstream | 13367 | 8987677 ~ 8987940 (-) |
| G235099 | NA | non-coding | upstream | 14587 | 8988897 ~ 8989099 (-) |
| G235135 | NA | non-coding | upstream | 93268 | 9067578 ~ 9067907 (-) |
| CI01000054_07165957_07169539 | HEYL | other | downstream | 1802340 | 7165435 ~ 7169539 (-) |
| CI01000054_06629482_06641861 | TRIQK | other | downstream | 2320000 | 6628082 ~ 6642160 (-) |
| G232274 | NA | other | downstream | 3764773 | 5206199 ~ 5209240 (-) |
| CI01000054_04671351_04681181 | PEF1 | other | downstream | 4301780 | 4670151 ~ 4681361 (-) |
| G231645 | NA | other | downstream | 4991190 | 3981847 ~ 3982823 (-) |
| G235216 | NA | other | upstream | 273729 | 9248039 ~ 9248538 (-) |
| CI01000054_09864693_09866871 | PPP1R11 | other | upstream | 889011 | 9863321 ~ 9867212 (-) |
| CI01000054_10817235_10819181 | TAC1 | other | upstream | 1829561 | 10816015 ~ 10819362 (-) |
| CI01000054_10872970_10881017 | SDHAF3 | other | upstream | 1896794 | 10871104 ~ 10881495 (-) |
