Gene
RNA
| Item | Value |
|---|---|
| gene id | G235099 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000054 |
| NCBI id | null |
| chromosome length | 13006764 |
| location | 8988897 ~ 8989099 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU266664 | True | 203 | lncRNA | 0.42 | 1 | 8988897 | 8989099 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000054_08953766_08966617 | TMEM57, TMEM57A | coding | downstream | 22280 | 8952134 ~ 8966617 (-) |
| CI01000054_08937312_08942587 | LDLRAP1, LDLRAP1A | coding | downstream | 46310 | 8937312 ~ 8942587 (-) |
| CI01000054_08721571_08723333 | NA | coding | downstream | 264815 | 8721008 ~ 8724208 (-) |
| CI01000054_08710955_08718087 | HDAC1, HDAC2.S, HDAC2, HDAC1.S | coding | downstream | 270810 | 8710787 ~ 8718087 (-) |
| CI01000054_08692653_08694052 | NA | coding | downstream | 294845 | 8692139 ~ 8694052 (-) |
| CI01000054_09077309_09080163 | NA | coding | upstream | 87732 | 9076831 ~ 9080812 (-) |
| CI01000054_09218869_09223868 | NA | coding | upstream | 229533 | 9218632 ~ 9224119 (-) |
| CI01000054_09453616_09482480 | LPCAT1 | coding | upstream | 463010 | 9452109 ~ 9482723 (-) |
| CI01000054_09483912_09484282 | MRPL36 | coding | upstream | 494713 | 9483147 ~ 9484282 (-) |
| CI01000054_09488559_09488870 | NA | coding | upstream | 499177 | 9488276 ~ 9488870 (-) |
| G235097 | NA | non-coding | downstream | 957 | 8987677 ~ 8987940 (-) |
| G235096 | NA | non-coding | downstream | 1490 | 8987101 ~ 8987407 (-) |
| G235080 | NA | non-coding | downstream | 14215 | 8974393 ~ 8974682 (-) |
| G235084 | NA | non-coding | downstream | 14587 | 8974013 ~ 8974310 (-) |
| G235064 | NA | non-coding | downstream | 76421 | 8897888 ~ 8912476 (-) |
| G235135 | NA | non-coding | upstream | 78479 | 9067578 ~ 9067907 (-) |
| G235150 | NA | non-coding | upstream | 95663 | 9084762 ~ 9084978 (-) |
| G235187 | NA | non-coding | upstream | 168382 | 9157481 ~ 9157736 (-) |
| G235202 | NA | non-coding | upstream | 208381 | 9197480 ~ 9197878 (-) |
| G235204 | NA | non-coding | upstream | 210767 | 9199866 ~ 9200151 (-) |
| CI01000054_07165957_07169539 | HEYL | other | downstream | 1817224 | 7165435 ~ 7169539 (-) |
| CI01000054_06629482_06641861 | TRIQK | other | downstream | 2334884 | 6628082 ~ 6642160 (-) |
| G232274 | NA | other | downstream | 3779657 | 5206199 ~ 5209240 (-) |
| CI01000054_04671351_04681181 | PEF1 | other | downstream | 4316664 | 4670151 ~ 4681361 (-) |
| G231645 | NA | other | downstream | 5006074 | 3981847 ~ 3982823 (-) |
| G235216 | NA | other | upstream | 258940 | 9248039 ~ 9248538 (-) |
| CI01000054_09864693_09866871 | PPP1R11 | other | upstream | 874222 | 9863321 ~ 9867212 (-) |
| CI01000054_10817235_10819181 | TAC1 | other | upstream | 1814772 | 10816015 ~ 10819362 (-) |
| CI01000054_10872970_10881017 | SDHAF3 | other | upstream | 1882005 | 10871104 ~ 10881495 (-) |
