Gene
RNA
| Item | Value |
|---|---|
| gene id | G235202 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000054 |
| NCBI id | null |
| chromosome length | 13006764 |
| location | 9197480 ~ 9197878 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU266771 | True | 399 | lncRNA | 0.47 | 1 | 9197480 | 9197878 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000054_09077309_09080163 | NA | coding | downstream | 116668 | 9076831 ~ 9080812 (-) |
| CI01000054_08953766_08966617 | TMEM57, TMEM57A | coding | downstream | 230863 | 8952134 ~ 8966617 (-) |
| CI01000054_08937312_08942587 | LDLRAP1, LDLRAP1A | coding | downstream | 254893 | 8937312 ~ 8942587 (-) |
| CI01000054_08721571_08723333 | NA | coding | downstream | 473398 | 8721008 ~ 8724208 (-) |
| CI01000054_08710955_08718087 | HDAC1, HDAC2.S, HDAC2, HDAC1.S | coding | downstream | 479393 | 8710787 ~ 8718087 (-) |
| CI01000054_09218869_09223868 | NA | coding | upstream | 20754 | 9218632 ~ 9224119 (-) |
| CI01000054_09453616_09482480 | LPCAT1 | coding | upstream | 254231 | 9452109 ~ 9482723 (-) |
| CI01000054_09483912_09484282 | MRPL36 | coding | upstream | 285934 | 9483147 ~ 9484282 (-) |
| CI01000054_09488559_09488870 | NA | coding | upstream | 290398 | 9488276 ~ 9488870 (-) |
| CI01000054_09495785_09497239 | IRX4B, IRX4 | coding | upstream | 297572 | 9495450 ~ 9497682 (-) |
| G235187 | NA | non-coding | downstream | 39744 | 9157481 ~ 9157736 (-) |
| G235150 | NA | non-coding | downstream | 112502 | 9084762 ~ 9084978 (-) |
| G235135 | NA | non-coding | downstream | 129573 | 9067578 ~ 9067907 (-) |
| G235099 | NA | non-coding | downstream | 208381 | 8988897 ~ 8989099 (-) |
| G235097 | NA | non-coding | downstream | 209540 | 8987677 ~ 8987940 (-) |
| G235204 | NA | non-coding | upstream | 1988 | 9199866 ~ 9200151 (-) |
| G235183 | NA | non-coding | upstream | 10140 | 9208018 ~ 9210521 (-) |
| G235210 | NA | non-coding | upstream | 39529 | 9237407 ~ 9237874 (-) |
| G235217 | NA | non-coding | upstream | 50759 | 9248637 ~ 9248863 (-) |
| CI01000054_07165957_07169539 | HEYL | other | downstream | 2025807 | 7165435 ~ 7169539 (-) |
| CI01000054_06629482_06641861 | TRIQK | other | downstream | 2543467 | 6628082 ~ 6642160 (-) |
| G232274 | NA | other | downstream | 3988240 | 5206199 ~ 5209240 (-) |
| CI01000054_04671351_04681181 | PEF1 | other | downstream | 4525247 | 4670151 ~ 4681361 (-) |
| G231645 | NA | other | downstream | 5214657 | 3981847 ~ 3982823 (-) |
| G235216 | NA | other | upstream | 50161 | 9248039 ~ 9248538 (-) |
| CI01000054_09864693_09866871 | PPP1R11 | other | upstream | 665443 | 9863321 ~ 9867212 (-) |
| CI01000054_10817235_10819181 | TAC1 | other | upstream | 1605993 | 10816015 ~ 10819362 (-) |
| CI01000054_10872970_10881017 | SDHAF3 | other | upstream | 1673226 | 10871104 ~ 10881495 (-) |
