Gene
RNA
| Item | Value |
|---|---|
| gene id | G235298 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000054 |
| NCBI id | null |
| chromosome length | 13006764 |
| location | 9400361 ~ 9400566 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU266878 | True | 206 | lncRNA | 0.37 | 1 | 9400361 | 9400566 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000054_09218869_09223868 | NA | coding | downstream | 176242 | 9218632 ~ 9224119 (-) |
| CI01000054_09077309_09080163 | NA | coding | downstream | 319549 | 9076831 ~ 9080812 (-) |
| CI01000054_08953766_08966617 | TMEM57, TMEM57A | coding | downstream | 433744 | 8952134 ~ 8966617 (-) |
| CI01000054_08937312_08942587 | LDLRAP1, LDLRAP1A | coding | downstream | 457774 | 8937312 ~ 8942587 (-) |
| CI01000054_08721571_08723333 | NA | coding | downstream | 676279 | 8721008 ~ 8724208 (-) |
| CI01000054_09453616_09482480 | LPCAT1 | coding | upstream | 51543 | 9452109 ~ 9482723 (-) |
| CI01000054_09483912_09484282 | MRPL36 | coding | upstream | 83246 | 9483147 ~ 9484282 (-) |
| CI01000054_09488559_09488870 | NA | coding | upstream | 87710 | 9488276 ~ 9488870 (-) |
| CI01000054_09495785_09497239 | IRX4B, IRX4 | coding | upstream | 94884 | 9495450 ~ 9497682 (-) |
| CI01000054_09531778_09544007 | NA | coding | upstream | 130944 | 9531510 ~ 9544510 (-) |
| G235250 | NA | non-coding | downstream | 83563 | 9316532 ~ 9316798 (-) |
| G235244 | NA | non-coding | downstream | 97657 | 9302438 ~ 9302704 (-) |
| G235239 | NA | non-coding | downstream | 106969 | 9292830 ~ 9293392 (-) |
| G235231 | NA | non-coding | downstream | 123003 | 9277139 ~ 9277358 (-) |
| G235224 | NA | non-coding | downstream | 138558 | 9261593 ~ 9261803 (-) |
| G235308 | NA | non-coding | upstream | 36903 | 9437469 ~ 9441851 (-) |
| G235350 | NA | non-coding | upstream | 126282 | 9526848 ~ 9527267 (-) |
| G235368 | NA | non-coding | upstream | 156198 | 9556764 ~ 9559903 (-) |
| G235575 | NA | non-coding | upstream | 176028 | 9576594 ~ 9576876 (-) |
| G235582 | NA | non-coding | upstream | 181856 | 9582422 ~ 9664231 (-) |
| G235216 | NA | other | downstream | 151823 | 9248039 ~ 9248538 (-) |
| CI01000054_07165957_07169539 | HEYL | other | downstream | 2228688 | 7165435 ~ 7169539 (-) |
| CI01000054_06629482_06641861 | TRIQK | other | downstream | 2746348 | 6628082 ~ 6642160 (-) |
| G232274 | NA | other | downstream | 4191121 | 5206199 ~ 5209240 (-) |
| CI01000054_04671351_04681181 | PEF1 | other | downstream | 4728128 | 4670151 ~ 4681361 (-) |
| CI01000054_09864693_09866871 | PPP1R11 | other | upstream | 462755 | 9863321 ~ 9867212 (-) |
| CI01000054_10817235_10819181 | TAC1 | other | upstream | 1403305 | 10816015 ~ 10819362 (-) |
| CI01000054_10872970_10881017 | SDHAF3 | other | upstream | 1470538 | 10871104 ~ 10881495 (-) |
| G236748 | NA | other | upstream | 1884628 | 11285194 ~ 11295784 (-) |
