G235350


Basic Information

Item Value
gene id G235350
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 9526848 ~ 9527267 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU266934
AGCAATATATTCTATTTACAATAGCAGCATTTTCTTAGTGATATGCTATTTACACTAGGTGAAAATAGTGATAAATTACCTATGTAAAAAAAAAATCAGTTCTTTGCAATAAGAGTAAATAGTAATTAGATGCTATGTACACTTTATATTGGCAGATACTATTTGCACCTCCGTATTTTTGTACATTAACAGGATGCAATAATATCATAGAGTGTAAATGATTATATTTATTAAAATGATTAAATGGATGCTGCCTTATTGGGAGAATAAAAACCCTCCCTACACCTTCCCCTAACCCTACCAATGTTCAGTCAGTAAATAAAAGACTTCATTAATCATGTTTTTTTTTTTTTTTTTTTTTTTTATCAAAGTGTTTAATTTTCGTTGTTCTTTTGTTTAGCCGTAAGCACACTGTTGCTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU266934 True 420 lncRNA 0.29 1 9526848 9527267

Neighbor

gene id symbol gene type direction distance location
CI01000054_09495785_09497239 IRX4B, IRX4 coding downstream 29166 9495450 ~ 9497682 (-)
CI01000054_09488559_09488870 NA coding downstream 37978 9488276 ~ 9488870 (-)
CI01000054_09483912_09484282 MRPL36 coding downstream 42566 9483147 ~ 9484282 (-)
CI01000054_09453616_09482480 LPCAT1 coding downstream 44125 9452109 ~ 9482723 (-)
CI01000054_09218869_09223868 NA coding downstream 302729 9218632 ~ 9224119 (-)
CI01000054_09531778_09544007 NA coding upstream 4243 9531510 ~ 9544510 (-)
CI01000054_09650064_09651286 MED10, MED10.S coding upstream 122540 9649807 ~ 9651286 (-)
CI01000054_09686420_09705911 NSUN2.S, NSUN2 coding upstream 158780 9686047 ~ 9705911 (-)
CI01000054_09812111_09813425 NA coding upstream 284591 9811858 ~ 9813501 (-)
CI01000054_09831831_09832148 NA coding upstream 304491 9831758 ~ 9832148 (-)
G235308 NA non-coding downstream 84997 9437469 ~ 9441851 (-)
G235298 NA non-coding downstream 126282 9400361 ~ 9400566 (-)
G235250 NA non-coding downstream 210050 9316532 ~ 9316798 (-)
G235244 NA non-coding downstream 224144 9302438 ~ 9302704 (-)
G235239 NA non-coding downstream 233456 9292830 ~ 9293392 (-)
G235368 NA non-coding upstream 29497 9556764 ~ 9559903 (-)
G235575 NA non-coding upstream 49327 9576594 ~ 9576876 (-)
G235582 NA non-coding upstream 55155 9582422 ~ 9664231 (-)
G235591 NA non-coding upstream 60792 9588059 ~ 9657253 (-)
G235641 NA non-coding upstream 143531 9670798 ~ 9671024 (-)
G235216 NA other downstream 278310 9248039 ~ 9248538 (-)
CI01000054_07165957_07169539 HEYL other downstream 2355175 7165435 ~ 7169539 (-)
CI01000054_06629482_06641861 TRIQK other downstream 2872835 6628082 ~ 6642160 (-)
G232274 NA other downstream 4317608 5206199 ~ 5209240 (-)
CI01000054_09864693_09866871 PPP1R11 other upstream 336054 9863321 ~ 9867212 (-)
CI01000054_10817235_10819181 TAC1 other upstream 1276604 10816015 ~ 10819362 (-)
CI01000054_10872970_10881017 SDHAF3 other upstream 1343837 10871104 ~ 10881495 (-)
G236748 NA other upstream 1757927 11285194 ~ 11295784 (-)
CI01000054_11780397_11781842 SNAPIN other upstream 2251623 11778890 ~ 11781880 (-)

Expression


Co-expression Network