Gene
RNA
| Item | Value |
|---|---|
| gene id | G235575 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000054 |
| NCBI id | null |
| chromosome length | 13006764 |
| location | 9576594 ~ 9576876 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU267183 | True | 283 | lncRNA | 0.37 | 1 | 9576594 | 9576876 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000054_09531778_09544007 | NA | coding | downstream | 32084 | 9531510 ~ 9544510 (-) |
| CI01000054_09495785_09497239 | IRX4B, IRX4 | coding | downstream | 78912 | 9495450 ~ 9497682 (-) |
| CI01000054_09488559_09488870 | NA | coding | downstream | 87724 | 9488276 ~ 9488870 (-) |
| CI01000054_09483912_09484282 | MRPL36 | coding | downstream | 92312 | 9483147 ~ 9484282 (-) |
| CI01000054_09453616_09482480 | LPCAT1 | coding | downstream | 93871 | 9452109 ~ 9482723 (-) |
| CI01000054_09650064_09651286 | MED10, MED10.S | coding | upstream | 72931 | 9649807 ~ 9651286 (-) |
| CI01000054_09686420_09705911 | NSUN2.S, NSUN2 | coding | upstream | 109171 | 9686047 ~ 9705911 (-) |
| CI01000054_09812111_09813425 | NA | coding | upstream | 234982 | 9811858 ~ 9813501 (-) |
| CI01000054_09831831_09832148 | NA | coding | upstream | 254882 | 9831758 ~ 9832148 (-) |
| CI01000054_09841097_09848347 | ATAT1 | coding | upstream | 264138 | 9841014 ~ 9848892 (-) |
| G235368 | NA | non-coding | downstream | 16691 | 9556764 ~ 9559903 (-) |
| G235350 | NA | non-coding | downstream | 49327 | 9526848 ~ 9527267 (-) |
| G235308 | NA | non-coding | downstream | 134743 | 9437469 ~ 9441851 (-) |
| G235298 | NA | non-coding | downstream | 176028 | 9400361 ~ 9400566 (-) |
| G235250 | NA | non-coding | downstream | 259796 | 9316532 ~ 9316798 (-) |
| G235582 | NA | non-coding | upstream | 5546 | 9582422 ~ 9664231 (-) |
| G235591 | NA | non-coding | upstream | 11183 | 9588059 ~ 9657253 (-) |
| G235641 | NA | non-coding | upstream | 93922 | 9670798 ~ 9671024 (-) |
| G235642 | NA | non-coding | upstream | 95152 | 9672028 ~ 9672418 (-) |
| G235643 | NA | non-coding | upstream | 96184 | 9673060 ~ 9673526 (-) |
| G235216 | NA | other | downstream | 328056 | 9248039 ~ 9248538 (-) |
| CI01000054_07165957_07169539 | HEYL | other | downstream | 2404921 | 7165435 ~ 7169539 (-) |
| CI01000054_06629482_06641861 | TRIQK | other | downstream | 2922581 | 6628082 ~ 6642160 (-) |
| G232274 | NA | other | downstream | 4367354 | 5206199 ~ 5209240 (-) |
| CI01000054_09864693_09866871 | PPP1R11 | other | upstream | 286445 | 9863321 ~ 9867212 (-) |
| CI01000054_10817235_10819181 | TAC1 | other | upstream | 1226995 | 10816015 ~ 10819362 (-) |
| CI01000054_10872970_10881017 | SDHAF3 | other | upstream | 1294228 | 10871104 ~ 10881495 (-) |
| G236748 | NA | other | upstream | 1708318 | 11285194 ~ 11295784 (-) |
| CI01000054_11780397_11781842 | SNAPIN | other | upstream | 2202014 | 11778890 ~ 11781880 (-) |
