Gene
RNA
| Item | Value |
|---|---|
| gene id | G235761 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000054 |
| NCBI id | null |
| chromosome length | 13006764 |
| location | 9891780 ~ 9892046 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU267398 | True | 267 | lncRNA | 0.38 | 1 | 9891780 | 9892046 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000054_09864693_09866871 | PPP1R11 | coding | downstream | 24745 | 9863321 ~ 9867212 (-) |
| CI01000054_09841097_09848347 | ATAT1 | coding | downstream | 42888 | 9841014 ~ 9848892 (-) |
| CI01000054_09831831_09832148 | NA | coding | downstream | 59632 | 9831758 ~ 9832148 (-) |
| CI01000054_09812111_09813425 | NA | coding | downstream | 78279 | 9811858 ~ 9813501 (-) |
| CI01000054_09686420_09705911 | NSUN2.S, NSUN2 | coding | downstream | 185869 | 9686047 ~ 9705911 (-) |
| CI01000054_09914091_09916621 | DDX39B | coding | upstream | 21324 | 9913370 ~ 9916621 (-) |
| CI01000054_10082299_10083956 | NA | coding | upstream | 189867 | 10081913 ~ 10084102 (-) |
| CI01000054_10124266_10128452 | NELFE.L, NELFE | coding | upstream | 232008 | 10124054 ~ 10128452 (-) |
| CI01000054_10162998_10168490 | NA | coding | upstream | 270921 | 10162967 ~ 10169049 (-) |
| CI01000054_10222056_10229581 | NA | coding | upstream | 329900 | 10221946 ~ 10229581 (-) |
| G235750 | NA | non-coding | downstream | 38256 | 9853261 ~ 9853524 (-) |
| G235706 | NA | non-coding | downstream | 62611 | 9821113 ~ 9829169 (-) |
| G235737 | NA | non-coding | downstream | 95785 | 9793671 ~ 9795995 (-) |
| G235651 | NA | non-coding | downstream | 194521 | 9696958 ~ 9697259 (-) |
| G235649 | NA | non-coding | downstream | 214160 | 9677283 ~ 9677620 (-) |
| G235764 | NA | non-coding | upstream | 37106 | 9929152 ~ 9936746 (-) |
| G235772 | NA | non-coding | upstream | 54078 | 9946124 ~ 9946394 (-) |
| G235790 | NA | non-coding | upstream | 83734 | 9975780 ~ 9976208 (-) |
| G235828 | NA | non-coding | upstream | 142107 | 10034153 ~ 10038735 (-) |
| G235687 | NA | non-coding | upstream | 142714 | 10034760 ~ 10122699 (-) |
| CI01000054_09483912_09484282 | MRPL36 | other | downstream | 406393 | 9483147 ~ 9484282 (-) |
| G235216 | NA | other | downstream | 643242 | 9248039 ~ 9248538 (-) |
| CI01000054_07165957_07169539 | HEYL | other | downstream | 2720107 | 7165435 ~ 7169539 (-) |
| CI01000054_06629482_06641861 | TRIQK | other | downstream | 3237767 | 6628082 ~ 6642160 (-) |
| CI01000054_10817235_10819181 | TAC1 | other | upstream | 911825 | 10816015 ~ 10819362 (-) |
| CI01000054_10872970_10881017 | SDHAF3 | other | upstream | 979058 | 10871104 ~ 10881495 (-) |
| G236748 | NA | other | upstream | 1393148 | 11285194 ~ 11295784 (-) |
| CI01000054_11780397_11781842 | SNAPIN | other | upstream | 1886844 | 11778890 ~ 11781880 (-) |
