Gene
RNA
| Item | Value |
|---|---|
| gene id | G235890 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000054 |
| NCBI id | null |
| chromosome length | 13006764 |
| location | 10380713 ~ 10380930 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU267533 | True | 218 | lncRNA | 0.36 | 1 | 10380713 | 10380930 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000054_10269355_10363708 | NPR1B, NPR1, NPR1A | coding | downstream | 16564 | 10268720 ~ 10364149 (-) |
| CI01000054_10248885_10261371 | INTS3 | coding | downstream | 119342 | 10248601 ~ 10261371 (-) |
| CI01000054_10230849_10243712 | NA | coding | downstream | 136875 | 10230849 ~ 10243838 (-) |
| CI01000054_10222056_10229581 | NA | coding | downstream | 151132 | 10221946 ~ 10229581 (-) |
| CI01000054_10162998_10168490 | NA | coding | downstream | 211664 | 10162967 ~ 10169049 (-) |
| CI01000054_10389232_10412773 | MYLIPA, MYLIP | coding | upstream | 8302 | 10389232 ~ 10412773 (-) |
| CI01000054_10518872_10568706 | JARID2B, JARID2 | coding | upstream | 137942 | 10518872 ~ 10568706 (-) |
| CI01000054_10645438_10672411 | NA | coding | upstream | 264212 | 10645142 ~ 10672681 (-) |
| CI01000054_10817235_10819181 | TAC1 | coding | upstream | 436212 | 10816015 ~ 10819362 (-) |
| CI01000054_10872970_10881017 | SDHAF3 | coding | upstream | 491885 | 10871104 ~ 10881495 (-) |
| G235674 | NA | non-coding | downstream | 84775 | 10219705 ~ 10295938 (-) |
| G235678 | NA | non-coding | downstream | 166310 | 10206853 ~ 10214403 (-) |
| G235687 | NA | non-coding | downstream | 258014 | 10034760 ~ 10122699 (-) |
| G235828 | NA | non-coding | downstream | 341978 | 10034153 ~ 10038735 (-) |
| G235790 | NA | non-coding | downstream | 404505 | 9975780 ~ 9976208 (-) |
| G235895 | NA | non-coding | upstream | 33024 | 10413954 ~ 10414236 (-) |
| G235919 | NA | non-coding | upstream | 42460 | 10423390 ~ 10423600 (-) |
| G235924 | NA | non-coding | upstream | 49622 | 10430552 ~ 10430780 (-) |
| G236383 | NA | non-coding | upstream | 73898 | 10454828 ~ 10455116 (-) |
| G236394 | NA | non-coding | upstream | 93140 | 10474070 ~ 10511429 (-) |
| CI01000054_09864693_09866871 | PPP1R11 | other | downstream | 513501 | 9863321 ~ 9867212 (-) |
| CI01000054_09483912_09484282 | MRPL36 | other | downstream | 895326 | 9483147 ~ 9484282 (-) |
| G235216 | NA | other | downstream | 1132175 | 9248039 ~ 9248538 (-) |
| CI01000054_07165957_07169539 | HEYL | other | downstream | 3209040 | 7165435 ~ 7169539 (-) |
| CI01000054_06629482_06641861 | TRIQK | other | downstream | 3726700 | 6628082 ~ 6642160 (-) |
| G236748 | NA | other | upstream | 904264 | 11285194 ~ 11295784 (-) |
| CI01000054_11780397_11781842 | SNAPIN | other | upstream | 1397960 | 11778890 ~ 11781880 (-) |
