Gene
RNA
| Item | Value |
|---|---|
| gene id | G235924 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000054 |
| NCBI id | null |
| chromosome length | 13006764 |
| location | 10430552 ~ 10430780 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU267572 | True | 229 | lncRNA | 0.46 | 1 | 10430552 | 10430780 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000054_10389232_10412773 | MYLIPA, MYLIP | coding | downstream | 17779 | 10389232 ~ 10412773 (-) |
| CI01000054_10269355_10363708 | NPR1B, NPR1, NPR1A | coding | downstream | 66403 | 10268720 ~ 10364149 (-) |
| CI01000054_10248885_10261371 | INTS3 | coding | downstream | 169181 | 10248601 ~ 10261371 (-) |
| CI01000054_10230849_10243712 | NA | coding | downstream | 186714 | 10230849 ~ 10243838 (-) |
| CI01000054_10222056_10229581 | NA | coding | downstream | 200971 | 10221946 ~ 10229581 (-) |
| CI01000054_10518872_10568706 | JARID2B, JARID2 | coding | upstream | 88092 | 10518872 ~ 10568706 (-) |
| CI01000054_10645438_10672411 | NA | coding | upstream | 214362 | 10645142 ~ 10672681 (-) |
| CI01000054_10817235_10819181 | TAC1 | coding | upstream | 386362 | 10816015 ~ 10819362 (-) |
| CI01000054_10872970_10881017 | SDHAF3 | coding | upstream | 442035 | 10871104 ~ 10881495 (-) |
| CI01000054_10910820_10938477 | COL28A1 | coding | upstream | 479594 | 10910374 ~ 10938477 (-) |
| G235919 | NA | non-coding | downstream | 6952 | 10423390 ~ 10423600 (-) |
| G235895 | NA | non-coding | downstream | 16316 | 10413954 ~ 10414236 (-) |
| G235890 | NA | non-coding | downstream | 49622 | 10380713 ~ 10380930 (-) |
| G235674 | NA | non-coding | downstream | 134614 | 10219705 ~ 10295938 (-) |
| G235678 | NA | non-coding | downstream | 216149 | 10206853 ~ 10214403 (-) |
| G236383 | NA | non-coding | upstream | 24048 | 10454828 ~ 10455116 (-) |
| G236394 | NA | non-coding | upstream | 43290 | 10474070 ~ 10511429 (-) |
| G236387 | NA | non-coding | upstream | 139445 | 10570225 ~ 10602954 (-) |
| G236384 | NA | non-coding | upstream | 186189 | 10616969 ~ 10628310 (-) |
| G236480 | NA | non-coding | upstream | 307762 | 10738542 ~ 10738848 (-) |
| CI01000054_09864693_09866871 | PPP1R11 | other | downstream | 563340 | 9863321 ~ 9867212 (-) |
| CI01000054_09483912_09484282 | MRPL36 | other | downstream | 945165 | 9483147 ~ 9484282 (-) |
| G235216 | NA | other | downstream | 1182014 | 9248039 ~ 9248538 (-) |
| CI01000054_07165957_07169539 | HEYL | other | downstream | 3258879 | 7165435 ~ 7169539 (-) |
| CI01000054_06629482_06641861 | TRIQK | other | downstream | 3776539 | 6628082 ~ 6642160 (-) |
| G236748 | NA | other | upstream | 854414 | 11285194 ~ 11295784 (-) |
| CI01000054_11780397_11781842 | SNAPIN | other | upstream | 1348110 | 11778890 ~ 11781880 (-) |
