G236023


Basic Information

Item Value
gene id G236023
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 10555820 ~ 10556236 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU267680
TTTCATGGCAGATTTAAAGTCAATTAAAATATAAAGAATTAAATTAAGAAATAAATAAACAGAAATCTTATTTACTATAAGCAAATAATTAAATAAGCAAATAAATCAATCATTTAATCAATCAATCACTCAATCAATTACTTAATCACTCAATCAATCAATCAAATCAACTCACTCACTCACTCGATCACTCGATCAATCACTCGATCATTTAATCAATCAATCAATCAATCAATCAATCAATCAATCAATCCATCCTGTCCTAACTTTTTTTGGTTGAATATCTGTTTCACTCTAATCATATCAGAAATAAAATGGGCTGTGGACACTGTTTCACATTGACTTGTCTTCAAACATTAAAAGACCAAGCCAAATCTGAGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU267680 True 381 lncRNA 0.28 2 10555820 10556236

Neighbor

gene id symbol gene type direction distance location
CI01000054_10508500_10513655 NA coding upstream 41963 10508500 ~ 10513857 (+)
CI01000054_10467566_10471168 NA coding upstream 84343 10467566 ~ 10471477 (+)
CI01000054_10420267_10420899 NA coding upstream 133731 10420156 ~ 10422089 (+)
CI01000054_10246428_10247072 NA coding upstream 308697 10246428 ~ 10247123 (+)
CI01000054_10215898_10219704 CK2B, BRAFLDRAFT_59924, CSNK2B coding upstream 335886 10215898 ~ 10219934 (+)
CI01000054_10601018_10615939 NA coding downstream 44738 10600974 ~ 10615954 (+)
CI01000054_10751348_10752449 NA coding downstream 195059 10751295 ~ 10752511 (+)
CI01000054_10759809_10795763 PARD6G, PARD6GB coding downstream 203573 10759809 ~ 10795780 (+)
CI01000054_10797926_10802248 NA coding downstream 241614 10797850 ~ 10802958 (+)
CI01000054_10805413_10815170 ASNS coding downstream 249177 10805413 ~ 10815359 (+)
G235968 NA non-coding upstream 100536 10454846 ~ 10455284 (+)
G235932 NA non-coding upstream 112174 10443428 ~ 10443646 (+)
G235915 NA non-coding upstream 117347 10437858 ~ 10438473 (+)
G235902 NA non-coding upstream 136679 10418801 ~ 10419141 (+)
G235899 NA non-coding upstream 140103 10415450 ~ 10415717 (+)
G236036 NA non-coding downstream 32838 10589074 ~ 10591197 (+)
G236115 NA non-coding downstream 172817 10729053 ~ 10729327 (+)
G236128 NA non-coding downstream 182331 10738567 ~ 10738884 (+)
G236149 NA non-coding downstream 290656 10846892 ~ 10847093 (+)
G235560 NA other upstream 163442 10388136 ~ 10392378 (+)
CI01000054_08325126_08329621 HPCAL4, VSNL1, VSNL1.S other upstream 2226232 8325126 ~ 8329716 (+)
G233306 NA other upstream 2250871 8304599 ~ 8304949 (+)
G233024 NA other upstream 2945927 7567523 ~ 7609893 (+)
G232870 NA other upstream 3667317 6887912 ~ 6888503 (+)
CI01000054_11564820_11568338 S100V2 other downstream 1008740 11564820 ~ 11568999 (+)
CI01000054_11633235_11635069 PRF1.8 other downstream 1076740 11632959 ~ 11635103 (+)
CI01000054_11648262_11648786 NA other downstream 1091743 11647959 ~ 11649495 (+)
G236874 NA other downstream 1257452 11813688 ~ 11816475 (+)
CI01000054_12887165_12901376 NA other downstream 2328666 12886994 ~ 12902006 (+)

Expression


Co-expression Network