G236128


Basic Information

Item Value
gene id G236128
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 10738567 ~ 10738884 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU267788
GTCCTAAGTATTCAGACCCTTTGCTCAGTATTTAGTAGAAGCCCCCTTTTGATCTAATACAGCCATGAGTCTTTTTGGGAAAGATGCAACAAGTTTTTCACACCTGGATTTGGGGATCCTCTGCCATTCCTTTTTGCAGATCCTCTCCAGTTCTGTCAGGTTGGATGGTAAACGTTGGTGGACAGCCATTTTTAGGTCTCTCCAGAGATGCTCAATTGGGTTTAAGTCAGGGCTCTGGCTGGGCCATTCAAGAACAGTCACGGAGTTGTTGTGAAGCCACTCCTTCATTATTTTAGCTGTGTGCTTAGGGTCATTGTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU267788 True 318 lncRNA 0.45 1 10738567 10738884

Neighbor

gene id symbol gene type direction distance location
CI01000054_10601018_10615939 NA coding upstream 122613 10600974 ~ 10615954 (+)
CI01000054_10508500_10513655 NA coding upstream 224710 10508500 ~ 10513857 (+)
CI01000054_10467566_10471168 NA coding upstream 267090 10467566 ~ 10471477 (+)
CI01000054_10420267_10420899 NA coding upstream 316478 10420156 ~ 10422089 (+)
CI01000054_10246428_10247072 NA coding upstream 491444 10246428 ~ 10247123 (+)
CI01000054_10751348_10752449 NA coding downstream 12411 10751295 ~ 10752511 (+)
CI01000054_10759809_10795763 PARD6G, PARD6GB coding downstream 20925 10759809 ~ 10795780 (+)
CI01000054_10797926_10802248 NA coding downstream 58966 10797850 ~ 10802958 (+)
CI01000054_10805413_10815170 ASNS coding downstream 66529 10805413 ~ 10815359 (+)
CI01000054_10884460_10894800 C1GALT1 coding downstream 142700 10881584 ~ 10894954 (+)
G236115 NA non-coding upstream 9240 10729053 ~ 10729327 (+)
G236036 NA non-coding upstream 147370 10589074 ~ 10591197 (+)
G236023 NA non-coding upstream 182331 10555820 ~ 10556236 (+)
G235968 NA non-coding upstream 283283 10454846 ~ 10455284 (+)
G236149 NA non-coding downstream 108008 10846892 ~ 10847093 (+)
G236150 NA non-coding downstream 111209 10850093 ~ 10850307 (+)
G236195 NA non-coding downstream 188079 10926963 ~ 10949688 (+)
G236176 NA non-coding downstream 275247 11014131 ~ 11075365 (+)
G235560 NA other upstream 346189 10388136 ~ 10392378 (+)
CI01000054_08325126_08329621 HPCAL4, VSNL1, VSNL1.S other upstream 2408979 8325126 ~ 8329716 (+)
G233306 NA other upstream 2433618 8304599 ~ 8304949 (+)
G233024 NA other upstream 3128674 7567523 ~ 7609893 (+)
G232870 NA other upstream 3850064 6887912 ~ 6888503 (+)
CI01000054_11564820_11568338 S100V2 other downstream 826092 11564820 ~ 11568999 (+)
CI01000054_11633235_11635069 PRF1.8 other downstream 894092 11632959 ~ 11635103 (+)
CI01000054_11648262_11648786 NA other downstream 909095 11647959 ~ 11649495 (+)
G236874 NA other downstream 1074804 11813688 ~ 11816475 (+)
CI01000054_12887165_12901376 NA other downstream 2146018 12886994 ~ 12902006 (+)

Expression


Co-expression Network