G236149


Basic Information

Item Value
gene id G236149
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 10846892 ~ 10847093 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU267809
CTCAGTTTGTTTTTCCACTGCAGTTTAGTACCACTTCAAAGTGGGTGGGATTATAGACTGATCTTTATAGTTGCGTCACCTCTACTGCCGTGACATCATCGTAAGTATGACACAAACGAGACAAACACAAACACTCCTTGGCTACCAACGAGAGGACCACGTCTACTGACCACGATTCAGCCATTTCTTTTTTTAAGTTGCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU267809 True 202 lncRNA 0.44 1 10846892 10847093

Neighbor

gene id symbol gene type direction distance location
CI01000054_10805413_10815170 ASNS coding upstream 31533 10805413 ~ 10815359 (+)
CI01000054_10797926_10802248 NA coding upstream 43934 10797850 ~ 10802958 (+)
CI01000054_10759809_10795763 PARD6G, PARD6GB coding upstream 51112 10759809 ~ 10795780 (+)
CI01000054_10751348_10752449 NA coding upstream 94381 10751295 ~ 10752511 (+)
CI01000054_10601018_10615939 NA coding upstream 230938 10600974 ~ 10615954 (+)
CI01000054_10884460_10894800 C1GALT1 coding downstream 34491 10881584 ~ 10894954 (+)
CI01000054_10905705_10908903 C1GALT1 coding downstream 55455 10902548 ~ 10909056 (+)
CI01000054_10964288_10964566 UMAD1 coding downstream 117195 10964288 ~ 10964649 (+)
CI01000054_10985849_11004067 GLCCI1 coding downstream 136995 10984088 ~ 11004096 (+)
CI01000054_11032632_11091062 RIMS3 coding downstream 185539 11032632 ~ 11091062 (+)
G236128 NA non-coding upstream 108008 10738567 ~ 10738884 (+)
G236115 NA non-coding upstream 117565 10729053 ~ 10729327 (+)
G236036 NA non-coding upstream 255695 10589074 ~ 10591197 (+)
G236023 NA non-coding upstream 290656 10555820 ~ 10556236 (+)
G236150 NA non-coding downstream 3000 10850093 ~ 10850307 (+)
G236195 NA non-coding downstream 79870 10926963 ~ 10949688 (+)
G236176 NA non-coding downstream 167038 11014131 ~ 11075365 (+)
CI01000054_11142387_11149427 NA non-coding downstream 302716 11141982 ~ 11150462 (+)
G235560 NA other upstream 454514 10388136 ~ 10392378 (+)
CI01000054_08325126_08329621 HPCAL4, VSNL1, VSNL1.S other upstream 2517304 8325126 ~ 8329716 (+)
G233306 NA other upstream 2541943 8304599 ~ 8304949 (+)
G233024 NA other upstream 3236999 7567523 ~ 7609893 (+)
G232870 NA other upstream 3958389 6887912 ~ 6888503 (+)
CI01000054_11564820_11568338 S100V2 other downstream 717883 11564820 ~ 11568999 (+)
CI01000054_11633235_11635069 PRF1.8 other downstream 785883 11632959 ~ 11635103 (+)
CI01000054_11648262_11648786 NA other downstream 800886 11647959 ~ 11649495 (+)
G236874 NA other downstream 966595 11813688 ~ 11816475 (+)
CI01000054_12887165_12901376 NA other downstream 2037809 12886994 ~ 12902006 (+)

Expression


Co-expression Network