Gene
RNA
| Item | Value |
|---|---|
| gene id | G236150 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000054 |
| NCBI id | null |
| chromosome length | 13006764 |
| location | 10850093 ~ 10850307 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU267810 | True | 215 | lncRNA | 0.43 | 1 | 10850093 | 10850307 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000054_10805413_10815170 | ASNS | coding | upstream | 34734 | 10805413 ~ 10815359 (+) |
| CI01000054_10797926_10802248 | NA | coding | upstream | 47135 | 10797850 ~ 10802958 (+) |
| CI01000054_10759809_10795763 | PARD6G, PARD6GB | coding | upstream | 54313 | 10759809 ~ 10795780 (+) |
| CI01000054_10751348_10752449 | NA | coding | upstream | 97582 | 10751295 ~ 10752511 (+) |
| CI01000054_10601018_10615939 | NA | coding | upstream | 234139 | 10600974 ~ 10615954 (+) |
| CI01000054_10884460_10894800 | C1GALT1 | coding | downstream | 31277 | 10881584 ~ 10894954 (+) |
| CI01000054_10905705_10908903 | C1GALT1 | coding | downstream | 52241 | 10902548 ~ 10909056 (+) |
| CI01000054_10964288_10964566 | UMAD1 | coding | downstream | 113981 | 10964288 ~ 10964649 (+) |
| CI01000054_10985849_11004067 | GLCCI1 | coding | downstream | 133781 | 10984088 ~ 11004096 (+) |
| CI01000054_11032632_11091062 | RIMS3 | coding | downstream | 182325 | 11032632 ~ 11091062 (+) |
| G236149 | NA | non-coding | upstream | 3000 | 10846892 ~ 10847093 (+) |
| G236128 | NA | non-coding | upstream | 111209 | 10738567 ~ 10738884 (+) |
| G236115 | NA | non-coding | upstream | 120766 | 10729053 ~ 10729327 (+) |
| G236036 | NA | non-coding | upstream | 258896 | 10589074 ~ 10591197 (+) |
| G236195 | NA | non-coding | downstream | 76656 | 10926963 ~ 10949688 (+) |
| G236176 | NA | non-coding | downstream | 163824 | 11014131 ~ 11075365 (+) |
| CI01000054_11142387_11149427 | NA | non-coding | downstream | 299502 | 11141982 ~ 11150462 (+) |
| G236249 | NA | non-coding | downstream | 376419 | 11226726 ~ 11233234 (+) |
| G235560 | NA | other | upstream | 457715 | 10388136 ~ 10392378 (+) |
| CI01000054_08325126_08329621 | HPCAL4, VSNL1, VSNL1.S | other | upstream | 2520505 | 8325126 ~ 8329716 (+) |
| G233306 | NA | other | upstream | 2545144 | 8304599 ~ 8304949 (+) |
| G233024 | NA | other | upstream | 3240200 | 7567523 ~ 7609893 (+) |
| G232870 | NA | other | upstream | 3961590 | 6887912 ~ 6888503 (+) |
| CI01000054_11564820_11568338 | S100V2 | other | downstream | 714669 | 11564820 ~ 11568999 (+) |
| CI01000054_11633235_11635069 | PRF1.8 | other | downstream | 782669 | 11632959 ~ 11635103 (+) |
| CI01000054_11648262_11648786 | NA | other | downstream | 797672 | 11647959 ~ 11649495 (+) |
| G236874 | NA | other | downstream | 963381 | 11813688 ~ 11816475 (+) |
| CI01000054_12887165_12901376 | NA | other | downstream | 2034595 | 12886994 ~ 12902006 (+) |
