Gene
RNA
| Item | Value |
|---|---|
| gene id | G236542 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000054 |
| NCBI id | null |
| chromosome length | 13006764 |
| location | 10867787 ~ 10867998 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU268246 | True | 212 | lncRNA | 0.42 | 1 | 10867787 | 10867998 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000054_10817235_10819181 | TAC1 | coding | downstream | 48425 | 10816015 ~ 10819362 (-) |
| CI01000054_10645438_10672411 | NA | coding | downstream | 195106 | 10645142 ~ 10672681 (-) |
| CI01000054_10518872_10568706 | JARID2B, JARID2 | coding | downstream | 299081 | 10518872 ~ 10568706 (-) |
| CI01000054_10389232_10412773 | MYLIPA, MYLIP | coding | downstream | 455014 | 10389232 ~ 10412773 (-) |
| CI01000054_10269355_10363708 | NPR1B, NPR1, NPR1A | coding | downstream | 503638 | 10268720 ~ 10364149 (-) |
| CI01000054_10872970_10881017 | SDHAF3 | coding | upstream | 4817 | 10871104 ~ 10881495 (-) |
| CI01000054_10910820_10938477 | COL28A1 | coding | upstream | 42376 | 10910374 ~ 10938477 (-) |
| CI01000054_10949424_10950271 | RPA3 | coding | upstream | 81321 | 10949319 ~ 10951456 (-) |
| CI01000054_11097818_11099299 | NA | coding | upstream | 229710 | 11097708 ~ 11099334 (-) |
| CI01000054_11184013_11193925 | EYA3, EYA2 | coding | upstream | 315732 | 11183730 ~ 11193925 (-) |
| G236533 | NA | non-coding | downstream | 19232 | 10848288 ~ 10848555 (-) |
| G236506 | NA | non-coding | downstream | 43014 | 10772245 ~ 10824773 (-) |
| G236480 | NA | non-coding | downstream | 128939 | 10738542 ~ 10738848 (-) |
| G236384 | NA | non-coding | downstream | 239477 | 10616969 ~ 10628310 (-) |
| G236551 | NA | non-coding | upstream | 26933 | 10894931 ~ 10895319 (-) |
| G236554 | NA | non-coding | upstream | 30469 | 10898467 ~ 10898951 (-) |
| G236555 | NA | non-coding | upstream | 35134 | 10903132 ~ 10904729 (-) |
| G236570 | NA | non-coding | upstream | 96300 | 10964298 ~ 10966446 (-) |
| G236596 | NA | non-coding | upstream | 133329 | 11001327 ~ 11001582 (-) |
| CI01000054_09864693_09866871 | PPP1R11 | other | downstream | 1000575 | 9863321 ~ 9867212 (-) |
| CI01000054_09483912_09484282 | MRPL36 | other | downstream | 1382400 | 9483147 ~ 9484282 (-) |
| G235216 | NA | other | downstream | 1619249 | 9248039 ~ 9248538 (-) |
| CI01000054_07165957_07169539 | HEYL | other | downstream | 3696114 | 7165435 ~ 7169539 (-) |
| G236748 | NA | other | upstream | 417196 | 11285194 ~ 11295784 (-) |
| CI01000054_11780397_11781842 | SNAPIN | other | upstream | 910892 | 11778890 ~ 11781880 (-) |
