G236666



Basic Information


Item Value
gene id G236666
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 11167624 ~ 11167944 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU268406
GCCGTCTGTTGTAGTCCTTAAACAGAATTCTTTAAAAGAAAATATCTCCCTTTGCATTGAACTTTGAGCGTTGTAACTTTGCAGATGTTGTTTGTGCTCTAACAGCAACATTACACACTAACTAAAGTTAAAAAAAGTGAAATCTTAATCAACCACGTCTTTAAAAGAACTTTGTGTTTCTGGACACTTAATTGCATGTAAGTTGCAATTAAAAGTAAATGCATTATTGTTTAAATTTATATTAAATGCAGTTATCTGAAGTGTCCTGGAACGTGCAGCATTATTCAATGTGTTGACATTATTTCCACTGAAACAAGAAGA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU268406 True 321 lncRNA 0.32 1 11167624 11167944

Neighbor


gene id symbol gene type direction distance location
CI01000054_11097818_11099299 NA coding downstream 68290 11097708 ~ 11099334 (-)
CI01000054_10949424_10950271 RPA3 coding downstream 216168 10949319 ~ 10951456 (-)
CI01000054_10910820_10938477 COL28A1 coding downstream 229147 10910374 ~ 10938477 (-)
CI01000054_10872970_10881017 SDHAF3 coding downstream 286129 10871104 ~ 10881495 (-)
CI01000054_10817235_10819181 TAC1 coding downstream 348262 10816015 ~ 10819362 (-)
CI01000054_11184013_11193925 EYA3, EYA2 coding upstream 15786 11183730 ~ 11193925 (-)
CI01000054_11209592_11214961 NA coding upstream 40105 11208049 ~ 11215113 (-)
CI01000054_11222307_11238293 NA coding upstream 54227 11222171 ~ 11239750 (-)
CI01000054_11354957_11355910 NA coding upstream 186696 11354640 ~ 11356188 (-)
CI01000054_11365718_11380961 THBS3B coding upstream 197076 11362295 ~ 11380961 (-)
G236664 NA non-coding downstream 8820 11158571 ~ 11158804 (-)
G236663 NA non-coding downstream 14250 11153133 ~ 11153374 (-)
G236662 NA non-coding downstream 14607 11152740 ~ 11153017 (-)
G236633 NA non-coding downstream 30402 11135547 ~ 11137222 (-)
G236601 NA non-coding downstream 134768 11018675 ~ 11032856 (-)
G236640 NA non-coding upstream 3798 11171742 ~ 11172107 (-)
G236667 NA non-coding upstream 5295 11173239 ~ 11173471 (-)
G236669 NA non-coding upstream 6359 11174303 ~ 11174791 (-)
G236644 NA non-coding upstream 10297 11178241 ~ 11179119 (-)
G236672 NA non-coding upstream 36775 11204719 ~ 11205657 (-)
CI01000054_09864693_09866871 PPP1R11 other downstream 1300412 9863321 ~ 9867212 (-)
CI01000054_09483912_09484282 MRPL36 other downstream 1682237 9483147 ~ 9484282 (-)
G235216 NA other downstream 1919086 9248039 ~ 9248538 (-)
G236748 NA other upstream 117250 11285194 ~ 11295784 (-)
CI01000054_11780397_11781842 SNAPIN other upstream 610946 11778890 ~ 11781880 (-)

Expression



Co-expression Network