G236676


Basic Information

Item Value
gene id G236676
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 11224863 ~ 11225911 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU268416
CTTCCTCTTAGTACATACAGTATCACTAGGTCTCAGTACAGTATCTATGACTCAAAAGGAACTGAAAGTAGTTGTTCTTGTTTGAACTTTGATAACAAAAAAAAAAAAAAACTGAACTGACTCTCTTGGGCTTATAAGAAACCAGCTGGCTTGTCATCAGCCCTAGTCACAGATTATTGTCAATGTTAACATTCCATAGCACACAACATTACCCTGTTCTCTTTCGTAAATCATGTCTTTCACATGATAGCAGAGTCTGAAAATATGATCAGAATTTAGAATCAGTTAATAGAACATAATCAGTTAATAATTGCATTTTTAATTTTGTTTGCCAGTACTTCTGTTTTTATTTCTATAGCTGTTTACTTTTTGTAATACCATGATGTAACAAACGTCTTCACTGTAGGTTTCACAATCCCAGGACATGGCTGACCTCTTTATTTTCATTACTCAGGGATTTTAAACCAACTCCTAGTATTAAACTTAGTTGTGTAACATGTCATGTATTGTGCTAAAAACACCTCAGTAATGCTGTGGCTTACTGAAGAGGTATGCTGTTCCTTTTCTAAGTGATCAGACCTATCTAAACTTATTTGGGCGAAAATATCATAGAAAACTAAGTTAATTAAAAGAAAAATAAATTAATTTTCATCAAGGTATAAACAAGTATGGTATAAATATCATACACTGTAAAGTAGTAACCTATGATTGTTAGCTTAAAGGGTTAGTTCACACAAAAATGAAAATTTCTGTCATTAATTACTCACCCTCATGTCGTTCTACACCCGTAAGACCTTTGTTCATCTTCAGAACACAAATTAAGATATTTTTGATGAAATCCGATGGCTCAGTGCAAGATTATTTACACTTTCAAATGCCCAGATAAGGTACTAAAAACATATTTAAAGCAGTTCATGTGACTACAGTGGTTCTACCTTAATATTATAAAGCAACGAGAATACTTTTTTGTGCACCAAAAAAAAACAAAATAACGACTTTTCAACAATATCTAGTGATGGGTGATTTCAAAACACTGCTTCGAATCTTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU268416 True 1049 lncRNA 0.32 1 11224863 11225911

Neighbor

gene id symbol gene type direction distance location
CI01000054_11209592_11214961 NA coding downstream 9750 11208049 ~ 11215113 (-)
CI01000054_11184013_11193925 EYA3, EYA2 coding downstream 30938 11183730 ~ 11193925 (-)
CI01000054_11097818_11099299 NA coding downstream 125529 11097708 ~ 11099334 (-)
CI01000054_10949424_10950271 RPA3 coding downstream 273407 10949319 ~ 10951456 (-)
CI01000054_10910820_10938477 COL28A1 coding downstream 286386 10910374 ~ 10938477 (-)
CI01000054_11354957_11355910 NA coding upstream 128729 11354640 ~ 11356188 (-)
CI01000054_11365718_11380961 THBS3B coding upstream 139109 11362295 ~ 11380961 (-)
CI01000054_11387319_11406159 MTX1B, MTX1 coding upstream 161408 11387319 ~ 11407070 (-)
CI01000054_11441495_11447523 NA coding upstream 215519 11441430 ~ 11447523 (-)
CI01000054_11464968_11474671 NA coding upstream 238483 11464394 ~ 11474702 (-)
G236646 NA non-coding downstream 3724 11216849 ~ 11221139 (-)
G236672 NA non-coding downstream 19206 11204719 ~ 11205657 (-)
G236644 NA non-coding downstream 45744 11178241 ~ 11179119 (-)
G236669 NA non-coding downstream 50072 11174303 ~ 11174791 (-)
G236667 NA non-coding downstream 51392 11173239 ~ 11173471 (-)
G236689 NA non-coding upstream 18721 11244632 ~ 11244971 (-)
G236695 NA non-coding upstream 27463 11253374 ~ 11253749 (-)
G236701 NA non-coding upstream 32581 11258492 ~ 11258750 (-)
G236705 NA non-coding upstream 38406 11264317 ~ 11334387 (-)
G236697 NA non-coding upstream 51840 11277751 ~ 11279011 (-)
CI01000054_10872970_10881017 SDHAF3 other downstream 343647 10871104 ~ 10881495 (-)
CI01000054_10817235_10819181 TAC1 other downstream 405518 10816015 ~ 10819362 (-)
CI01000054_09864693_09866871 PPP1R11 other downstream 1357651 9863321 ~ 9867212 (-)
CI01000054_09483912_09484282 MRPL36 other downstream 1739476 9483147 ~ 9484282 (-)
G235216 NA other downstream 1976325 9248039 ~ 9248538 (-)
G236748 NA other upstream 59283 11285194 ~ 11295784 (-)
CI01000054_11780397_11781842 SNAPIN other upstream 552979 11778890 ~ 11781880 (-)

Expression


Co-expression Network