G236281


Basic Information

Item Value
gene id G236281
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 11296149 ~ 11297001 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU267952
TTCAGCACTCTTTCTGAAACAAGTGTAACTGAAAACATATTTAAATCAGTTCATGTGAGTACAGTGGTTGAATATTAATATTATAAAGCGATGAGAATATTTCTGGTGCGCCAAAAAACAAAACAAAATAACGACTTATATAGTGATGGCCGATTTCAAAATACTGCTCCAGGAAGCTTCGGAGCATTTTGAATCAGCGGTTCGGAGCGCCAAAGTCACGTGATTTCAGCAGTTTGGCGGTTTGACACGCGATCCGAATCATGATTCGATACGCTGATTCATAACGCTCCGAAGCTTAGTTCACCCAAAAATGAAAATTCTGAATATGAAAATGAAATGAAAAATGAAAAATATGAATTCTGAAAATGAATAAACTAACCCTTTAAAGACAAAATGAGAATTCACAATTTAACTTTCATAATGTGACAGAAACAAAAATAATATTCAGCTGTAAAAATGTTTATATATAAAGGGGATATATAAAGACAGAAACTGACGTGGAAATGTATGCCATCTGAAGATGTGTAGGACTACAAACTTTTTGGTGCTCATATACAAATTCAACATTGTTTATGCAAATGTAAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU267952 True 586 lncRNA 0.33 2 11296149 11297001

Neighbor

gene id symbol gene type direction distance location
CI01000054_11280613_11285395 NA coding upstream 10754 11280613 ~ 11285395 (+)
CI01000054_11171795_11178974 NA coding upstream 117040 11171731 ~ 11179109 (+)
CI01000054_11162176_11165636 NA coding upstream 130322 11160059 ~ 11165827 (+)
CI01000054_11154206_11157480 NA coding upstream 138319 11154129 ~ 11157830 (+)
CI01000054_11142387_11149427 NA coding upstream 146026 11141982 ~ 11150462 (+)
CI01000054_11409512_11412290 TXNIP, TXNIPA coding downstream 112253 11409254 ~ 11413131 (+)
CI01000054_11536181_11537063 NA coding downstream 237756 11534757 ~ 11537164 (+)
CI01000054_11564820_11568338 S100V2 coding downstream 267819 11564820 ~ 11568999 (+)
CI01000054_11600741_11608257 NA coding downstream 303505 11600506 ~ 11608390 (+)
CI01000054_11633235_11635069 PRF1.8 coding downstream 335958 11632959 ~ 11635103 (+)
G236222 NA non-coding upstream 17144 11277411 ~ 11279005 (+)
G236257 NA non-coding upstream 51866 11244063 ~ 11244283 (+)
G236249 NA non-coding upstream 62915 11226726 ~ 11233234 (+)
G236176 NA non-coding upstream 220784 11014131 ~ 11075365 (+)
G236305 NA non-coding downstream 72094 11369095 ~ 11373596 (+)
G236362 NA non-coding downstream 210424 11507425 ~ 11507904 (+)
G236373 NA non-coding downstream 252603 11549604 ~ 11550696 (+)
G236822 NA non-coding downstream 300265 11597266 ~ 11597518 (+)
G235560 NA other upstream 903771 10388136 ~ 10392378 (+)
CI01000054_08325126_08329621 HPCAL4, VSNL1, VSNL1.S other upstream 2966561 8325126 ~ 8329716 (+)
G233306 NA other upstream 2991200 8304599 ~ 8304949 (+)
G233024 NA other upstream 3686256 7567523 ~ 7609893 (+)
G232870 NA other upstream 4407646 6887912 ~ 6888503 (+)
CI01000054_11648262_11648786 NA other downstream 350978 11647959 ~ 11649495 (+)
G236874 NA other downstream 516687 11813688 ~ 11816475 (+)
CI01000054_12887165_12901376 NA other downstream 1587901 12886994 ~ 12902006 (+)

Expression


Co-expression Network