G236849


Basic Information

Item Value
gene id G236849
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 11616827 ~ 11617146 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU268614
TGCGTAGAAGAAGGATCCGGGTACTGAAATGGCCAGCCTGCAGTCCAGATCTTTCACCCATAGAAAACATTTGGCGCATCATAAAGAGGAAGATGCGACAAAGAAGACCTAAGACAGTTGAGCACCTAGAAGCCTGTATTAGACAAGAATGGGACAACATTCCTATTCCTAAACTTGAGCAACTTGTCTCCTCAGTCCCCAGACGTTTGCAGACTGTTATAAAAAGAAGAGGGGATACCACACAGTGGTAAACATGGCCTTGTCCCAACTTTTTTGAGATGTGTTGATGCCATGAAATTTAAAATCAACTTATTTTTCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU268614 True 320 lncRNA 0.43 1 11616827 11617146

Neighbor

gene id symbol gene type direction distance location
CI01000054_11600741_11608257 NA coding upstream 8465 11600506 ~ 11608390 (+)
CI01000054_11564820_11568338 S100V2 coding upstream 48377 11564820 ~ 11568999 (+)
CI01000054_11536181_11537063 NA coding upstream 79663 11534757 ~ 11537164 (+)
CI01000054_11409512_11412290 TXNIP, TXNIPA coding upstream 203696 11409254 ~ 11413131 (+)
CI01000054_11289604_11337266 NA coding upstream 279447 11289604 ~ 11337380 (+)
CI01000054_11633235_11635069 PRF1.8 coding downstream 15813 11632959 ~ 11635103 (+)
CI01000054_11637464_11637950 NA coding downstream 20187 11637333 ~ 11638191 (+)
CI01000054_11648262_11648786 NA coding downstream 30813 11647959 ~ 11649495 (+)
CI01000054_11659093_11663413 THAP7 coding downstream 41947 11659093 ~ 11663607 (+)
CI01000054_11666236_11693431 NA coding downstream 49090 11666236 ~ 11693479 (+)
G236848 NA non-coding upstream 1910 11614637 ~ 11614917 (+)
G236822 NA non-coding upstream 19309 11597266 ~ 11597518 (+)
G236373 NA non-coding upstream 66131 11549604 ~ 11550696 (+)
G236362 NA non-coding upstream 108923 11507425 ~ 11507904 (+)
G236851 NA non-coding downstream 5459 11622605 ~ 11622853 (+)
G236852 NA non-coding downstream 11140 11628286 ~ 11628516 (+)
G236853 NA non-coding downstream 11561 11628707 ~ 11629027 (+)
G236857 NA non-coding downstream 22758 11639904 ~ 11640550 (+)
G236924 NA non-coding downstream 79713 11696859 ~ 11697087 (+)
G235560 NA other upstream 1224449 10388136 ~ 10392378 (+)
CI01000054_08325126_08329621 HPCAL4, VSNL1, VSNL1.S other upstream 3287239 8325126 ~ 8329716 (+)
G233306 NA other upstream 3311878 8304599 ~ 8304949 (+)
G233024 NA other upstream 4006934 7567523 ~ 7609893 (+)
G236874 NA other downstream 196542 11813688 ~ 11816475 (+)
CI01000054_12887165_12901376 NA other downstream 1267756 12886994 ~ 12902006 (+)

Expression


Co-expression Network