G236851


Basic Information

Item Value
gene id G236851
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 11622605 ~ 11622853 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU268616
GCTCGGTATAATAGTTTTCAAGAAAATTATGTAAATTGGTAAACTATTTAGCCTAGGCTACTAAAACAAACACCAAAACTGTTAAAAAATTATAGCAATATGCGCAATTTTTTTTATTTTGGATCAATTTTCTGTTCTGATCTCAACAAGTCTGGGCAAACTTCTGAGTAGGCACCAATCAGAGGCCGCATTTTTATGATGTCATCATGTAGACTTCTTACAAAGTATTTTACAGTATTTTAAAACTAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU268616 True 249 lncRNA 0.31 1 11622605 11622853

Neighbor

gene id symbol gene type direction distance location
CI01000054_11600741_11608257 NA coding upstream 14243 11600506 ~ 11608390 (+)
CI01000054_11564820_11568338 S100V2 coding upstream 54155 11564820 ~ 11568999 (+)
CI01000054_11536181_11537063 NA coding upstream 85441 11534757 ~ 11537164 (+)
CI01000054_11409512_11412290 TXNIP, TXNIPA coding upstream 209474 11409254 ~ 11413131 (+)
CI01000054_11289604_11337266 NA coding upstream 285225 11289604 ~ 11337380 (+)
CI01000054_11633235_11635069 PRF1.8 coding downstream 10106 11632959 ~ 11635103 (+)
CI01000054_11637464_11637950 NA coding downstream 14480 11637333 ~ 11638191 (+)
CI01000054_11648262_11648786 NA coding downstream 25106 11647959 ~ 11649495 (+)
CI01000054_11659093_11663413 THAP7 coding downstream 36240 11659093 ~ 11663607 (+)
CI01000054_11666236_11693431 NA coding downstream 43383 11666236 ~ 11693479 (+)
G236849 NA non-coding upstream 5459 11616827 ~ 11617146 (+)
G236848 NA non-coding upstream 7688 11614637 ~ 11614917 (+)
G236822 NA non-coding upstream 25087 11597266 ~ 11597518 (+)
G236373 NA non-coding upstream 71909 11549604 ~ 11550696 (+)
G236852 NA non-coding downstream 5433 11628286 ~ 11628516 (+)
G236853 NA non-coding downstream 5854 11628707 ~ 11629027 (+)
G236857 NA non-coding downstream 17051 11639904 ~ 11640550 (+)
G236924 NA non-coding downstream 74006 11696859 ~ 11697087 (+)
G236942 NA non-coding downstream 128661 11751514 ~ 11751727 (+)
G235560 NA other upstream 1230227 10388136 ~ 10392378 (+)
CI01000054_08325126_08329621 HPCAL4, VSNL1, VSNL1.S other upstream 3293017 8325126 ~ 8329716 (+)
G233306 NA other upstream 3317656 8304599 ~ 8304949 (+)
G233024 NA other upstream 4012712 7567523 ~ 7609893 (+)
G236874 NA other downstream 190835 11813688 ~ 11816475 (+)
CI01000054_12887165_12901376 NA other downstream 1262049 12886994 ~ 12902006 (+)

Expression


Co-expression Network