G236895


Basic Information

Item Value
gene id G236895
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 11957072 ~ 11958097 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU268685
GTGTTTATTACAAGTGGCAGATCCTGAGACTATGGCATCTAAAAGCAGAATTTTACAGAAATATGTTTAATTGTGTTTCCATAAACATAGTTATTGCAAATCAGCTATATAGGAGCATAAATTAAAGTTCAATAGCCTGTTTTGAACAGTGTGACACAATATATGCTCTTTCACCAGAGAAAAGCTCATTTTACCTTAAAGGTTGATGCAAAATAAAATGTCAATCTTCACAGTCATACAGTTTTCACAGGTAGGAGCATCCATCTACCAGGTACACGAGCTTAAATAAAATTCATTCATCACTCACTCTCATGCCATTCCAAACCGATATGATTTTCTTACTTCGGTGGAACACAAAAGGAGATGTTTAACCGAATGTTCATGCTGAGTTTTTTTGTACGTTTAAAGTGATTGGGGACAAACGCAGTTGAGCTCTCAAATCTCTAAACTGCTGTATATATAAAGAGGCCAGCTATTAAGAGCTGTACAAGTAAACCTCACTTCCCTGACCTCAAGAGACACATTTAGGGGCTGCTGGTTTTAGAGTCCTTGTTAGCAGGCCCTTCTCCCATGCCGGTTAATGCTGGTTTGAATTGCACTCAGAGTGCAAGTAGGACCAGTTACATTGGTGCCGTGACCCGGAGGAGAGTGAGGTTTAGGCAAGTGGTATATAGCTGTGCAGGTAAACCTCACTCCATTGGCCTCAAGAGGCAAGCTATAGGGGCTTATGTTAGCTCCCCCTCGCTAGACGTCCAGCGAGGAGGAGCGGATGTACAACCACACCTTAATCCTACCCTAACCCTACCCACAACTCTATCTCTCCACCCCATTCGACATCCAGAGAGGTGGAGAGTTCTATCCCTCCACCCCACTGGACGTCCTGAGAGGAGGAGCTGGCCATCATAGACTCTGCAGTGAGTACCACATGGCTTTTACCCCAGTCTTTTTAGGACACCCCCTGCTATGCCAGTTGATGCTGGTTCGAATCCCGCTCTGAAGCAGTGTAAGACCAGTTACATTGGTGCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU268685 True 1026 lncRNA 0.44 1 11957072 11958097

Neighbor

gene id symbol gene type direction distance location
CI01000054_11911995_11913792 NA coding upstream 43215 11911135 ~ 11913857 (+)
CI01000054_11793688_11807158 NA coding upstream 149695 11793688 ~ 11807377 (+)
CI01000054_11785504_11789031 CHTOP coding upstream 167375 11785314 ~ 11789697 (+)
CI01000054_11783772_11784302 NA coding upstream 172066 11783772 ~ 11785006 (+)
CI01000054_11666236_11693431 NA coding upstream 263593 11666236 ~ 11693479 (+)
CI01000054_11984922_12021876 FCHSD2 coding downstream 26825 11984922 ~ 12021945 (+)
CI01000054_12030200_12039539 NA coding downstream 72103 12030200 ~ 12039539 (+)
CI01000054_12039863_12047999 RPS3.L, RPS3, RPS3.S coding downstream 81766 12039863 ~ 12047999 (+)
CI01000054_12049115_12062566 KCTD14 coding downstream 91018 12049115 ~ 12062566 (+)
CI01000054_12064156_12077740 INTS4 coding downstream 105682 12063779 ~ 12077848 (+)
G236886 NA non-coding upstream 49689 11898230 ~ 11907383 (+)
G236972 NA non-coding upstream 101309 11854973 ~ 11855763 (+)
G236942 NA non-coding upstream 205345 11751514 ~ 11751727 (+)
G236924 NA non-coding upstream 259985 11696859 ~ 11697087 (+)
G236857 NA non-coding upstream 316522 11639904 ~ 11640550 (+)
G236888 NA non-coding downstream 193 11958290 ~ 11968299 (+)
G236887 NA non-coding downstream 153532 12111629 ~ 12170392 (+)
G237015 NA non-coding downstream 266499 12224596 ~ 12225316 (+)
G237016 NA non-coding downstream 267579 12225676 ~ 12226328 (+)
G236879 NA non-coding downstream 351358 12309455 ~ 12310013 (+)
G236874 NA other upstream 140597 11813688 ~ 11816475 (+)
CI01000054_11648262_11648786 NA other upstream 308047 11647959 ~ 11649495 (+)
CI01000054_11633235_11635069 PRF1.8 other upstream 323008 11632959 ~ 11635103 (+)
CI01000054_11564820_11568338 S100V2 other upstream 388073 11564820 ~ 11568999 (+)
G235560 NA other upstream 1564694 10388136 ~ 10392378 (+)
CI01000054_12887165_12901376 NA other downstream 926805 12886994 ~ 12902006 (+)

Expression


Co-expression Network