G237179



Basic Information


Item Value
gene id G237179
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 11968909 ~ 11969500 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU269044
GGGAGGGACCTGGTTTGAGTCCCAAAAGTGATGCACACTAAAACAGCAATGGTTTTCTGGTAGGAACTGAAATTGCGCTAGGATTTGGCACAGATGTCGAGTCCCTCCACACACACTATAAAGGGATCAAAATGAACACGAAATGCAAACATCCAAGAGACCACACACATTAAGCCGAAACCTCCAGCGAGCTCTCGCATGTACAAAAATCACACCCAGCCTGTTGGAAGCGATCTGTCCTTGGGGCTGGCGCTGCCACATTATCAGCGTTTTAATGGAGACATGGTGCATTAAAACACTATTAAAGTGTGCCAGCACCGCTCACAAAGGAGTGTGAGAATCGATCGTGGCCGTTTTACGCTTTGTCATTCTGATTAATACAGTAGGACAGAGCGGGTGGGGTGAAAACATGTGTTGTGTTGCACTACATGATGAAAATTCCTATGGAAGGAGAGAGTCTTTAAACAGCAAGGCTGGGAAAGCTCGGGAAAGAACCTGATAGAGACATCTGGCCTTGGAATGACCTGCTCCAAACCCATCCTGCCCCAGAAAACAAAAACAAAACAACATGCACCCCGACTCTGACCCCCTG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU269044 True 592 lncRNA 0.47 1 11968909 11969500

Neighbor


gene id symbol gene type direction distance location
CI01000054_11873443_11903635 SEPT7 coding downstream 64653 11872998 ~ 11904256 (-)
CI01000054_11815575_11845247 EEPD1 coding downstream 122763 11815297 ~ 11846146 (-)
CI01000054_11780397_11781842 SNAPIN coding downstream 187033 11778890 ~ 11781880 (-)
CI01000054_11758803_11774872 NA coding downstream 194037 11758297 ~ 11774872 (-)
CI01000054_11724484_11731711 SYT11A coding downstream 237198 11723995 ~ 11731711 (-)
CI01000054_12078098_12079883 AAMDC coding upstream 108430 12077930 ~ 12079896 (-)
CI01000054_12106998_12109333 AQP11 coding upstream 136685 12106185 ~ 12109835 (-)
CI01000054_12217279_12251613 MYO7A, MYO7AA coding upstream 247047 12216547 ~ 12251613 (-)
CI01000054_12266910_12288366 CAPN5A, CAPN5 coding upstream 297316 12266816 ~ 12288366 (-)
CI01000054_12302853_12308339 DCUN1D5.L, DCUN1D5, DCNL5 coding upstream 332987 12302487 ~ 12308339 (-)
G237101 NA non-coding downstream 10795 11957060 ~ 11958114 (-)
G237087 NA non-coding downstream 57759 11909433 ~ 11911150 (-)
G237079 NA non-coding downstream 179271 11782600 ~ 11789638 (-)
G237125 NA non-coding downstream 354002 11614543 ~ 11614907 (-)
G237181 NA non-coding upstream 2168 11971668 ~ 11971928 (-)
G237184 NA non-coding upstream 6067 11975567 ~ 11975935 (-)
CI01000054_11964578_11981248 NA non-coding upstream 8480 11964377 ~ 11981319 (-)
G237207 NA non-coding upstream 27713 11997213 ~ 11997840 (-)
G237212 NA non-coding upstream 59264 12028764 ~ 12029016 (-)
G236748 NA other downstream 673125 11285194 ~ 11295784 (-)
CI01000054_10872970_10881017 SDHAF3 other downstream 1087693 10871104 ~ 10881495 (-)
CI01000054_10817235_10819181 TAC1 other downstream 1149564 10816015 ~ 10819362 (-)
CI01000054_09864693_09866871 PPP1R11 other downstream 2101697 9863321 ~ 9867212 (-)

Expression



Co-expression Network