G237045


Basic Information

Item Value
gene id G237045
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 12365801 ~ 12366046 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU268854
GTTAGGCACGACGCAAAGCGGAGTGCCTGCAACCCCTTCAGCCGTGACTTATTCACGATACAGCACTAGCCTCGAGTATCTTATTGCTTTTATAAAAGGTTACCACACAATACAAATATTAAAGCCAAAAATATGTATCAATGCAACTTTCATGAAGTAAACTTTCACTAAAGCCTTCCTTCCGCCTGAAAAAAATAGTCCCTGACCGTGAACAGCAACAGAAGTTATATTATTACACCATTAGAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU268854 True 246 lncRNA 0.39 1 12365801 12366046

Neighbor

gene id symbol gene type direction distance location
CI01000054_12321079_12339203 LRCH3 coding upstream 26598 12321079 ~ 12339203 (+)
CI01000054_12318711_12319755 SERP2, SERP1, SERP1.S coding upstream 45831 12318312 ~ 12320602 (+)
CI01000054_12296634_12299462 NA coding upstream 66253 12296634 ~ 12299548 (+)
CI01000054_12191048_12211237 GDPD4A, GDPD4 coding upstream 154564 12189522 ~ 12211237 (+)
CI01000054_12142398_12166344 PAK1 coding upstream 198802 12142398 ~ 12166999 (+)
CI01000054_12524575_12697096 UNC13C coding downstream 158529 12524575 ~ 12697096 (+)
CI01000054_12811634_12819065 NA coding downstream 445588 12811634 ~ 12819280 (+)
CI01000054_12846104_12850954 NA coding downstream 479132 12845178 ~ 12851346 (+)
CI01000054_12887165_12901376 NA coding downstream 521027 12886994 ~ 12902006 (+)
CI01000054_12982344_12998857 NA coding downstream 614883 12980767 ~ 12999175 (+)
G237043 NA non-coding upstream 5478 12358290 ~ 12360323 (+)
G236879 NA non-coding upstream 55788 12309455 ~ 12310013 (+)
G237016 NA non-coding upstream 139473 12225676 ~ 12226328 (+)
G237015 NA non-coding upstream 140485 12224596 ~ 12225316 (+)
G237047 NA non-coding downstream 1631 12367677 ~ 12367916 (+)
G237052 NA non-coding downstream 14385 12380431 ~ 12380747 (+)
G237063 NA non-coding downstream 27533 12393579 ~ 12393793 (+)
G237066 NA non-coding downstream 29609 12395655 ~ 12395983 (+)
G237067 NA non-coding downstream 32445 12398491 ~ 12398754 (+)
G236874 NA other upstream 549326 11813688 ~ 11816475 (+)
CI01000054_11648262_11648786 NA other upstream 716776 11647959 ~ 11649495 (+)
CI01000054_11633235_11635069 PRF1.8 other upstream 731737 11632959 ~ 11635103 (+)
CI01000054_11564820_11568338 S100V2 other upstream 796802 11564820 ~ 11568999 (+)
G235560 NA other upstream 1973423 10388136 ~ 10392378 (+)

Expression


Co-expression Network