G237066


Basic Information

Item Value
gene id G237066
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 12395655 ~ 12395983 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU268876
TTATTAATAAACAATTAAAATATCTCCTTGCTGTTTTTGTCACATTCATAATCATTACTTTTGCAGGCTTTTTATGGCAAGCTTAGCATTTTGCTTCGCATCACCCACAGGATGTGTTCATTTTGGCGAGTACATCGGACCCACTCTGACAAGGCGACATTAATTGGTTCGACATTAAGTGACAATTCAACTATATCCAATGAACAAAGAAGCTAGTATTTTGCTCCACTCTTGACTGGTGGACTAGCGTCCAGGGGATGTTGCGGTTATGGAGGCCCCTCCTCAAAACCCGAGGCCCTAGGCAATTGCCTGCTCTGTCTATAGGTAGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU268876 True 329 lncRNA 0.43 1 12395655 12395983

Neighbor

gene id symbol gene type direction distance location
CI01000054_12321079_12339203 LRCH3 coding upstream 56452 12321079 ~ 12339203 (+)
CI01000054_12318711_12319755 SERP2, SERP1, SERP1.S coding upstream 75685 12318312 ~ 12320602 (+)
CI01000054_12296634_12299462 NA coding upstream 96107 12296634 ~ 12299548 (+)
CI01000054_12191048_12211237 GDPD4A, GDPD4 coding upstream 184418 12189522 ~ 12211237 (+)
CI01000054_12142398_12166344 PAK1 coding upstream 228656 12142398 ~ 12166999 (+)
CI01000054_12524575_12697096 UNC13C coding downstream 128592 12524575 ~ 12697096 (+)
CI01000054_12811634_12819065 NA coding downstream 415651 12811634 ~ 12819280 (+)
CI01000054_12846104_12850954 NA coding downstream 449195 12845178 ~ 12851346 (+)
CI01000054_12887165_12901376 NA coding downstream 491090 12886994 ~ 12902006 (+)
CI01000054_12982344_12998857 NA coding downstream 584946 12980767 ~ 12999175 (+)
G237063 NA non-coding upstream 1862 12393579 ~ 12393793 (+)
G237052 NA non-coding upstream 14908 12380431 ~ 12380747 (+)
G237047 NA non-coding upstream 27739 12367677 ~ 12367916 (+)
G237045 NA non-coding upstream 29609 12365801 ~ 12366046 (+)
G237043 NA non-coding upstream 35332 12358290 ~ 12360323 (+)
G237067 NA non-coding downstream 2508 12398491 ~ 12398754 (+)
G237068 NA non-coding downstream 3745 12399728 ~ 12400104 (+)
G237069 NA non-coding downstream 4561 12400544 ~ 12400783 (+)
G237072 NA non-coding downstream 24395 12420378 ~ 12420785 (+)
G237075 NA non-coding downstream 31055 12427038 ~ 12427413 (+)
G236874 NA other upstream 579180 11813688 ~ 11816475 (+)
CI01000054_11648262_11648786 NA other upstream 746630 11647959 ~ 11649495 (+)
CI01000054_11633235_11635069 PRF1.8 other upstream 761591 11632959 ~ 11635103 (+)
CI01000054_11564820_11568338 S100V2 other upstream 826656 11564820 ~ 11568999 (+)
G235560 NA other upstream 2003277 10388136 ~ 10392378 (+)

Expression


Co-expression Network