G237067


Basic Information

Item Value
gene id G237067
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 12398491 ~ 12398754 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU268877
TTTTTGTAAAGGGCGTTTGGCTTAATCTTTGCACGTTCACTTTGTAGACACTGGATCAGTACTCCCGTCTACATCAAGCATGACCTTTGTAATGTGATTACGTCATGCGTGCGGATTGCAGAGCTAGTGCAAGACGAGCATTTGTGGTTAAAAAGAATATACTTTTTTTTTTTTTTTTTTTCGAAAATGACCGGTTGTTTCGTTAGATAAGACCCTTATTCCTCGTCTGGGACCTGCATTGAAACTGCAATTCTGACCTTATAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU268877 True 264 lncRNA 0.39 1 12398491 12398754

Neighbor

gene id symbol gene type direction distance location
CI01000054_12321079_12339203 LRCH3 coding upstream 59288 12321079 ~ 12339203 (+)
CI01000054_12318711_12319755 SERP2, SERP1, SERP1.S coding upstream 78521 12318312 ~ 12320602 (+)
CI01000054_12296634_12299462 NA coding upstream 98943 12296634 ~ 12299548 (+)
CI01000054_12191048_12211237 GDPD4A, GDPD4 coding upstream 187254 12189522 ~ 12211237 (+)
CI01000054_12142398_12166344 PAK1 coding upstream 231492 12142398 ~ 12166999 (+)
CI01000054_12524575_12697096 UNC13C coding downstream 125821 12524575 ~ 12697096 (+)
CI01000054_12811634_12819065 NA coding downstream 412880 12811634 ~ 12819280 (+)
CI01000054_12846104_12850954 NA coding downstream 446424 12845178 ~ 12851346 (+)
CI01000054_12887165_12901376 NA coding downstream 488319 12886994 ~ 12902006 (+)
CI01000054_12982344_12998857 NA coding downstream 582175 12980767 ~ 12999175 (+)
G237066 NA non-coding upstream 2508 12395655 ~ 12395983 (+)
G237063 NA non-coding upstream 4698 12393579 ~ 12393793 (+)
G237052 NA non-coding upstream 17744 12380431 ~ 12380747 (+)
G237047 NA non-coding upstream 30575 12367677 ~ 12367916 (+)
G237045 NA non-coding upstream 32445 12365801 ~ 12366046 (+)
G237068 NA non-coding downstream 974 12399728 ~ 12400104 (+)
G237069 NA non-coding downstream 1790 12400544 ~ 12400783 (+)
G237072 NA non-coding downstream 21624 12420378 ~ 12420785 (+)
G237075 NA non-coding downstream 28284 12427038 ~ 12427413 (+)
G237369 NA non-coding downstream 40615 12439369 ~ 12439587 (+)
G236874 NA other upstream 582016 11813688 ~ 11816475 (+)
CI01000054_11648262_11648786 NA other upstream 749466 11647959 ~ 11649495 (+)
CI01000054_11633235_11635069 PRF1.8 other upstream 764427 11632959 ~ 11635103 (+)
CI01000054_11564820_11568338 S100V2 other upstream 829492 11564820 ~ 11568999 (+)
G235560 NA other upstream 2006113 10388136 ~ 10392378 (+)

Expression


Co-expression Network