Gene
RNA
| Item | Value |
|---|---|
| gene id | G237068 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000054 |
| NCBI id | null |
| chromosome length | 13006764 |
| location | 12399728 ~ 12400104 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU268878 | False | 377 | lncRNA | 0.42 | 1 | 12399728 | 12400104 |
| TU268881 | True | 307 | lncRNA | 0.43 | 1 | 12399798 | 12400104 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000054_12321079_12339203 | LRCH3 | coding | upstream | 60525 | 12321079 ~ 12339203 (+) |
| CI01000054_12318711_12319755 | SERP2, SERP1, SERP1.S | coding | upstream | 79758 | 12318312 ~ 12320602 (+) |
| CI01000054_12296634_12299462 | NA | coding | upstream | 100180 | 12296634 ~ 12299548 (+) |
| CI01000054_12191048_12211237 | GDPD4A, GDPD4 | coding | upstream | 188491 | 12189522 ~ 12211237 (+) |
| CI01000054_12142398_12166344 | PAK1 | coding | upstream | 232729 | 12142398 ~ 12166999 (+) |
| CI01000054_12524575_12697096 | UNC13C | coding | downstream | 124471 | 12524575 ~ 12697096 (+) |
| CI01000054_12811634_12819065 | NA | coding | downstream | 411530 | 12811634 ~ 12819280 (+) |
| CI01000054_12846104_12850954 | NA | coding | downstream | 445074 | 12845178 ~ 12851346 (+) |
| CI01000054_12887165_12901376 | NA | coding | downstream | 486969 | 12886994 ~ 12902006 (+) |
| CI01000054_12982344_12998857 | NA | coding | downstream | 580825 | 12980767 ~ 12999175 (+) |
| G237067 | NA | non-coding | upstream | 974 | 12398491 ~ 12398754 (+) |
| G237066 | NA | non-coding | upstream | 3745 | 12395655 ~ 12395983 (+) |
| G237063 | NA | non-coding | upstream | 5935 | 12393579 ~ 12393793 (+) |
| G237052 | NA | non-coding | upstream | 18981 | 12380431 ~ 12380747 (+) |
| G237047 | NA | non-coding | upstream | 31812 | 12367677 ~ 12367916 (+) |
| G237069 | NA | non-coding | downstream | 440 | 12400544 ~ 12400783 (+) |
| G237072 | NA | non-coding | downstream | 20274 | 12420378 ~ 12420785 (+) |
| G237075 | NA | non-coding | downstream | 26934 | 12427038 ~ 12427413 (+) |
| G237369 | NA | non-coding | downstream | 39265 | 12439369 ~ 12439587 (+) |
| G237376 | NA | non-coding | downstream | 211918 | 12612022 ~ 12613528 (+) |
| G236874 | NA | other | upstream | 583253 | 11813688 ~ 11816475 (+) |
| CI01000054_11648262_11648786 | NA | other | upstream | 750703 | 11647959 ~ 11649495 (+) |
| CI01000054_11633235_11635069 | PRF1.8 | other | upstream | 765664 | 11632959 ~ 11635103 (+) |
| CI01000054_11564820_11568338 | S100V2 | other | upstream | 830729 | 11564820 ~ 11568999 (+) |
| G235560 | NA | other | upstream | 2007350 | 10388136 ~ 10392378 (+) |
