G237376


Basic Information

Item Value
gene id G237376
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 12612022 ~ 12613528 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU269274
ACCTAAGAGTGAAAACAGTGAAGTAAACAGAAAAGAGTGTAAACAGGACAAACTGTTGTTAATGCCTTCAGTCTGAACTCAAAAATGATTGTACTTTTGACAGAAAATGACTTTGCATACATTGAAAGAATAGGAACACCAAAAAATGTCCATATGACTTTAGCAGCAACTCCATAAAAAGACAGCAGATAGTGACGAGGCACTATCCATGCAACTCATTTGTGCATGTGCATATTCCAACTTGCTGTAAGACACATTGCGTCAAATTCAGGTTTGTATGCAATCTCAAATGTGATATGAGACCTGAGTAAATGATGACAGAAGTTAATTTTTGGTTGAACTCTTCCTTTAAGAGTTTTAACAGTTTTTAATCAGTTTTGTTTTCTATATCAGAGGCCACATTCACACAGCAGCAGAATACGGTTGTCAGTCCTGTATCTGAGTCCTTAATACGGTTACGTTCACACACAGTACGGTTATTTACAGGTGTGACAACTGAATTCTATAACCGAACTCACTCCCGCAAATTTTCAGGACTCACAACCGCATTCTCGGAATTTTTGCGCTGTGTGAACGGAACAGGACTGGACAACTAGTTGTCTGTCACGTCATACAGTGCGAGAGAGCCGCTCTTCTAAGGTGTTTTGTGTGTGGTTTCGCTTTCAGTAACTTACAGCGACAGAGATATGAGCTGTGCGTCATCTTAAGATGTTAGATCCAGTCACTGTTCTCCACCGGAGCTCCCCCGTCAGTTTTGTGTTTCTTTTCCAAATTAAAATACCGTGTCATGCACGAGTGCAACGGTTAAACACTCCGGCTATGGCGTGTTTACATGCTGCTGTTGGTTAATGAAGTTTGAATGGATACACTTTTCAGTTTTATGGACGTCGCCATCTTTAATATTACATTGGTCACTGTCGTTATGGTTACTAGTAAGAGAATACGGGCTTGACTCTCGTTGCACGTTCATACAGACAGTGTTCCAGACGTTACTGTAAGTTGCTGTGTGAATGGGACATTTCGAGACTCACACCTGTAAATAAATGCAGTTGCAATCCCAAAAACTGACAGTGTGAACGTGGCCAGAGTGTGACATTTTGTGAGTTGCATCTGCAGGTAAAAATAGGACCTGTTCTCCAAACGAAATGAAAAGGCTGTTGACACTGTGTTTAGTTGTTTGGCAGCCGAACTTGAAGATTCAGAGAGCATCTGCAGGGAGTGATTATTGTTAACCAGTGATGGGAGTGTGTTCGCCTGTCAATTACGAATGTGTGCGTGCATGTGTGCGTGTGTGTGTGTGAGTTTGTATAATCAATGTAAATAAACAGATTTGTTGTGTTGAAACCCTTCCAGGGAGTCTTTGTGAAAAATGATTGGAGTCAATCATTGCACATTCTATGTTTAACAGCTGAGATTTAAATGTGCAGTCTTTAAAATATGTAATGTTTAAAGGCATACTACTGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU269274 True 1464 lncRNA 0.41 2 12612022 12613528

Neighbor

gene id symbol gene type direction distance location
CI01000054_12321079_12339203 LRCH3 coding upstream 272819 12321079 ~ 12339203 (+)
CI01000054_12318711_12319755 SERP2, SERP1, SERP1.S coding upstream 292052 12318312 ~ 12320602 (+)
CI01000054_12296634_12299462 NA coding upstream 312474 12296634 ~ 12299548 (+)
CI01000054_12191048_12211237 GDPD4A, GDPD4 coding upstream 400785 12189522 ~ 12211237 (+)
CI01000054_12142398_12166344 PAK1 coding upstream 445023 12142398 ~ 12166999 (+)
CI01000054_12811634_12819065 NA coding downstream 198106 12811634 ~ 12819280 (+)
CI01000054_12846104_12850954 NA coding downstream 231650 12845178 ~ 12851346 (+)
CI01000054_12887165_12901376 NA coding downstream 273545 12886994 ~ 12902006 (+)
CI01000054_12982344_12998857 NA coding downstream 367401 12980767 ~ 12999175 (+)
G237369 NA non-coding upstream 172435 12439369 ~ 12439587 (+)
G237075 NA non-coding upstream 184609 12427038 ~ 12427413 (+)
G237072 NA non-coding upstream 191237 12420378 ~ 12420785 (+)
G237069 NA non-coding upstream 211239 12400544 ~ 12400783 (+)
G237068 NA non-coding upstream 211918 12399728 ~ 12400104 (+)
G237374 NA non-coding downstream 4994 12618522 ~ 12629743 (+)
G237436 NA non-coding downstream 257188 12870716 ~ 12878293 (+)
G237621 NA non-coding downstream 341004 12954532 ~ 12954797 (+)
G237627 NA non-coding downstream 353100 12966628 ~ 12966937 (+)
G236874 NA other upstream 795547 11813688 ~ 11816475 (+)
CI01000054_11648262_11648786 NA other upstream 962997 11647959 ~ 11649495 (+)
CI01000054_11633235_11635069 PRF1.8 other upstream 977958 11632959 ~ 11635103 (+)
CI01000054_11564820_11568338 S100V2 other upstream 1043023 11564820 ~ 11568999 (+)
G235560 NA other upstream 2219644 10388136 ~ 10392378 (+)

Expression


Co-expression Network