CI01000055_01961331_01962015


Basic Information

Item Value
gene id CI01000055_01961331_01962015
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000055
NCBI id null
chromosome length 6774723
location 1961013 ~ 1962448 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000055_01961331_01962015.mRNA
CTATAAAGCCCCCTTCTGCCCGTAACCACTCACACACAAGAACGCACGCACACGCACACATCCCAGGAAAACCTTTCGTATTGTGCTACAAACAACAGCGGGATGACGTCGCATTCCCTACTTCAGATCTGGTGGTTTATTTACAGTGTCTTCTCTTGTCCCATTCGATGCGACACCTGAATAGCAACCTGATGTACTGTAAGTGGAGTCCCATGCAAGTTCGTCTGCCTTCGTTTTGATCACCTAGGCGGGATGAATAACAGCTTTGAGAAGATCGCTGCCCCATGTTAGCGACTAAGCCTTTTCCCCAAGGAAGCAATGTGGTTCAACCCACGACAAAAACCTACAGATGGAAGACCCAGCTGTGCCATGTATTCAAGGGCTTTGGGTGAAGAGGGGCCACATGGAATCGTGTCTGGTGGGCCTTCAGCCTCTCTGCCCGGCCTCCTTGCGCAGGCCGGACAAGGAGGTCTGCGCCGATGCTCTTCTCCACTGTCTTCTTTCTTTATATTTACTATAAATGCAAAAGAAAAAGAGAAAACATGAGTTAATTTGCATTGTGTGCTGTTGAACTGCATGAAGACTATTTAATATGCACATACAGTGGGGTCCAAAAGTCGGAGACCATTAGTGAAAATGTTTCTGTTTTGCATTTTTATAATTTAAGAAATTTCCATTCCAAACTGTAAGCATGACAATTTAAAGGAAAAATGTAATTGAATAATTCCTATGAAATAATAGTATTATTAAAAATAATGTTTTTTTTTTTCACTTTTTTCCATTACAATTTTTCTATTACAAATTATATTATCAACATAATGATTTGAAGGAAAAATTCGACTGAAATGATGATGATGATAATAATAATAATAATATTAGTAATAATAATCATTATTATTTTTTATTAATTTCCAATAGAAATGATCAGCATAACAATTCGAAGGAAAAAAATCTACTGAAAAATTCCTATGAAATAATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000055_01961331_01962015.mRNA True 979 mRNA 0.38 2 1961013 1962448

Neighbor

gene id symbol gene type direction distance location
CI01000055_01936268_01937799 C1QTNF1 coding upstream 23171 1936268 ~ 1937842 (+)
CI01000055_01897725_01900568 SLC16A3 coding upstream 60212 1896274 ~ 1900801 (+)
CI01000055_01848384_01850380 NA coding upstream 110285 1847964 ~ 1850728 (+)
CI01000055_01796139_01801260 MBTD1, MBTD1.L coding upstream 158827 1796139 ~ 1803517 (+)
CI01000055_01782542_01789268 TDRKH coding upstream 171554 1782030 ~ 1789459 (+)
CI01000055_02038946_02039783 NA coding downstream 76281 2038729 ~ 2040178 (+)
CI01000055_02060775_02077202 NA coding downstream 98130 2060578 ~ 2077486 (+)
CI01000055_02152005_02168439 NA coding downstream 188943 2151391 ~ 2168459 (+)
CI01000055_02420414_02422942 NA coding downstream 457966 2420414 ~ 2423696 (+)
CI01000055_02425304_02429638 ENPP7.1, ENPP7.2 coding downstream 462856 2425304 ~ 2429719 (+)
G238660 NA non-coding upstream 3563 1957136 ~ 1957450 (+)
G238659 NA non-coding upstream 4026 1956602 ~ 1956987 (+)
G238658 NA non-coding upstream 5070 1955724 ~ 1955943 (+)
G238651 NA non-coding upstream 43098 1917688 ~ 1917915 (+)
G238507 NA non-coding upstream 83481 1868954 ~ 1877532 (+)
G238667 NA non-coding downstream 11180 1973628 ~ 1982052 (+)
G238673 NA non-coding downstream 29954 1992402 ~ 2366225 (+)
G238691 NA non-coding downstream 78787 2041235 ~ 2043160 (+)
G238754 NA non-coding downstream 254189 2216637 ~ 2228752 (+)
G238806 NA non-coding downstream 295021 2257469 ~ 2259939 (+)
G238534 NA other upstream 291769 1668410 ~ 1669244 (+)
G237840 NA other upstream 1541081 418925 ~ 419932 (+)
G237680 NA other upstream 1939851 20902 ~ 21162 (+)
CI01000055_02542526_02542861 NA other downstream 578674 2542216 ~ 2544118 (+)
G239761 NA other downstream 2199802 4162250 ~ 4213402 (+)
G239755 NA other downstream 2291762 4254210 ~ 4255092 (+)
CI01000055_04265119_04272728 NA other downstream 2301579 4265119 ~ 4273913 (+)
CI01000055_05163240_05166231 PIGY, PYURF other downstream 3203044 5162990 ~ 5166647 (+)

Expression


Co-expression Network