CI01000055_02060775_02077202


Basic Information

Item Value
gene id CI01000055_02060775_02077202
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000055
NCBI id null
chromosome length 6774723
location 2060578 ~ 2077486 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000055_02060775_02077202.mRNA
GAATAAAAAGCTGAAGGCTCTGGAAGGGTGCACTTTGCCATTATTCATGGGAACTTCAAAGCCTTCGTAATTAAATTGGAAGAATACCTAACAAAGAAACAGCCACAACGGAAAACTAAAGGAGGGAGCGAGAGAGAGAGTAGGAAAAAAGGAGAAGGAGAACAAATACTGGCGCCAAAGTGAAGCCATGTCGAGCAATGTCTGGAAAGATCCTGAGGGATGTTGGGAAGTGGTGCAACCCCAGAGCACAGATGGATCTGGAGGTGGATCTGAGAGGCGAATCACATCATCTCTCCCCTCCGCCCACTCCAGGAATGCCACAGACTAGCGTACAGCCTGCTATGATGAGGCTGACCACCGTCTACCTCAGTTTGTTCAACCAGACTGAATGCAGTCTGAGACGAGACACAGGTGAGGAATACGACACAAAAGAACGAAGACCAAAAAAGCGAAGAAACAAATCTTGTTACAATTCACAATCCACAAGATGTGACGTGCCGTGTGTGGCTACCATTTCAGCAGCGAACGGCGTTGGGACAGCAGAGGCCCGGACAGCTGGTGTTGTGTGTGTGTTTGCCAGGACAGCGACTGTTAAGGTGATGAGTGAGGAGCGATTTGGTAGCAGCATGAGGCAGGTTATCTCTCAACAGCCTTATCATTCTTTATATCTGAGTAATAACACACCGTCTAGAGGAAAGCAGCAGCCTGCCATCGCACACGCCGCCCGTAGTAAAGCATACACACGCGGCCAAAAACAATCACCGCAGCCCCTCACGTGCCACCCAATTTCCAAGCACCTTCAGAAAAACACACCAGATGTGCCCCCATTATGGGGCAGCAAACCCCCACCGACGAACCATACTACAGCCGCCAAACACAACCACGCAATCCCATCCACAACGTCCTTTGGTGGACCTTTGGCTTTTAATAGGGTCTTTTTTAGTTCAGAGGAAAATATACAGTGTGGAATGAGCCTCCCTGTGACAGAGAACGTCTTGTTTACTGACACAATGCAAAAAGCCCAGCACGAAAGATGGGATTGGGGGGTGGGTGGTGAAGGGGGGCATCGGGGCAAGAAGTACAACGTACAGCATCGGGGGATGGGGGGGATGAGAGCAAGAGGAAACACAGAAGCCTGTTCATTCATGCTGGTGTATCCAATCGAATTAGAGCTCAGCTTAAAACCACCAAAACATCATGAATCAGCTTCACAGTTCCACCATTTTTCCCTCTCTTACTCCATTGAGTTTCTATAGCAGCCAGTTCACATGGAGGTCATGAGCGTTGCATAAGGCAATGGCTGTCCAACCACATTACCTGCAACAGTCCAAACAAAGCTGAAAATCTTGCAGGGTGACGCACCAATCTACCGTTTCACTGCAACATGAGAAAGCACCGTGTTTTGCACTGGGGTAAGTTTCATCATATACAACAAACCATTATGTAGCTGTAGATTATGACTACCTGAGGCTTGCTAGTCAAGACTGCTGGGTACTTATTGTATCACATCTTACTGAACAGCAGTGGGGGTCCACAATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000055_02060775_02077202.mRNA True 1540 mRNA 0.48 6 2060578 2077486

Neighbor

gene id symbol gene type direction distance location
CI01000055_02038946_02039783 NA coding upstream 20400 2038729 ~ 2040178 (+)
CI01000055_01961331_01962015 NA coding upstream 98130 1961013 ~ 1962448 (+)
CI01000055_01936268_01937799 C1QTNF1 coding upstream 122736 1936268 ~ 1937842 (+)
CI01000055_01897725_01900568 SLC16A3 coding upstream 159777 1896274 ~ 1900801 (+)
CI01000055_01848384_01850380 NA coding upstream 209850 1847964 ~ 1850728 (+)
CI01000055_02152005_02168439 NA coding downstream 73905 2151391 ~ 2168459 (+)
CI01000055_02420414_02422942 NA coding downstream 342928 2420414 ~ 2423696 (+)
CI01000055_02425304_02429638 ENPP7.1, ENPP7.2 coding downstream 347818 2425304 ~ 2429719 (+)
CI01000055_02542526_02542861 NA coding downstream 464730 2542216 ~ 2544118 (+)
CI01000055_02601849_02607123 NA coding downstream 523244 2600730 ~ 2607536 (+)
G238691 NA non-coding upstream 17418 2041235 ~ 2043160 (+)
G238667 NA non-coding upstream 78526 1973628 ~ 1982052 (+)
G238660 NA non-coding upstream 103128 1957136 ~ 1957450 (+)
G238659 NA non-coding upstream 103591 1956602 ~ 1956987 (+)
G238658 NA non-coding upstream 104635 1955724 ~ 1955943 (+)
G238754 NA non-coding downstream 139151 2216637 ~ 2228752 (+)
G238806 NA non-coding downstream 179983 2257469 ~ 2259939 (+)
G238825 NA non-coding downstream 226755 2304241 ~ 2306652 (+)
G238850 NA non-coding downstream 292563 2370049 ~ 2370365 (+)
G238862 NA non-coding downstream 325012 2402498 ~ 2403127 (+)
G238534 NA other upstream 391334 1668410 ~ 1669244 (+)
G237840 NA other upstream 1640646 418925 ~ 419932 (+)
G237680 NA other upstream 2039416 20902 ~ 21162 (+)
G239761 NA other downstream 2084764 4162250 ~ 4213402 (+)
G239755 NA other downstream 2176724 4254210 ~ 4255092 (+)
CI01000055_04265119_04272728 NA other downstream 2186541 4265119 ~ 4273913 (+)
CI01000055_05163240_05166231 PIGY, PYURF other downstream 3088006 5162990 ~ 5166647 (+)

Expression


Co-expression Network