CI01000055_02542526_02542861


Basic Information

Item Value
gene id CI01000055_02542526_02542861
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000055
NCBI id null
chromosome length 6774723
location 2542216 ~ 2544118 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000055_02542526_02542861.mRNA
GTACAAATGTTGTGCAACATGAAAAATGCTTGTTGCAGAAGAAATGTACATAGTGAAGGACTGAACATATGAATAGATAGAAATGATCAATAATGAAAAAAGATATGTACATGGATGGACGAATGAATGAATATGATAATTCACTTAATCTAAAGATTTACAAAACAGTTACATTAAAAATTCTGTTTTATTGTGGTAATTTTTGACCTTAGAAATGCTGCTATGAACTGAATCGTCAGTAAAGAGCAAGAGGAACCAGAAAATTACCAGACAAAAGTGAATTAAGCACCCTAGCAGCTTCCACTGGACCATGAGCACTGATCATTCTGCGCTGAAGGGTTCAGCCCTGGTTAATGGAGCAGAGCTGGCGACAGCCACTGGAGGAGCAGAGGGGTCCTGCTCTCGCTGTACCCTTCCTTTTGGTGTGGTTCTCCTGATCATTGGAGTTGCAGTCACAGCGGTAGCCTACAGTTTCAGCACCCATGGATCAACCATCTCCATTCTGGGACTTCTGCTTCTCATCAGTGGACTGTTGCTTCTGGGCTTCAGTGCAGTGTGCAGGAGATGCAGAAAGAGAAGAAAAATGGACAGATCGTGGGAGAGTCAGACTGACCTGGTAGAGAGTCGGAGGAATAGCTTTGATTAAAATATGTTTTGGAATGACTGAAAATGAATTCATTTGAATCCATTTGTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000055_02542526_02542861.mRNA False 695 mRNA 0.41 1 2542216 2542910

Neighbor

gene id symbol gene type direction distance location
CI01000055_02425304_02429638 ENPP7.1, ENPP7.2 coding upstream 112497 2425304 ~ 2429719 (+)
CI01000055_02420414_02422942 NA coding upstream 118520 2420414 ~ 2423696 (+)
CI01000055_02152005_02168439 NA coding upstream 373757 2151391 ~ 2168459 (+)
CI01000055_02060775_02077202 NA coding upstream 464730 2060578 ~ 2077486 (+)
CI01000055_02038946_02039783 NA coding upstream 502038 2038729 ~ 2040178 (+)
CI01000055_02601849_02607123 NA coding downstream 57820 2600730 ~ 2607536 (+)
CI01000055_02608904_02621376 RAB40B.L, MGC114680, RAB40B coding downstream 65994 2608904 ~ 2621462 (+)
CI01000055_02646852_02680018 GRIN2C coding downstream 101440 2644350 ~ 2680037 (+)
CI01000055_02729512_02734190 NAT9 coding downstream 186602 2729512 ~ 2734772 (+)
CI01000055_02760466_02767918 NA coding downstream 217201 2760111 ~ 2767934 (+)
G239117 NA non-coding upstream 79248 2456309 ~ 2462968 (+)
G239116 NA non-coding upstream 88245 2448318 ~ 2453971 (+)
G239114 NA non-coding upstream 99281 2441176 ~ 2442935 (+)
G238862 NA non-coding upstream 139089 2402498 ~ 2403127 (+)
G238850 NA non-coding upstream 171851 2370049 ~ 2370365 (+)
G239178 NA non-coding downstream 7858 2550768 ~ 2551066 (+)
G239180 NA non-coding downstream 16062 2558972 ~ 2560176 (+)
G239185 NA non-coding downstream 20720 2563630 ~ 2564524 (+)
G239228 NA non-coding downstream 174207 2717117 ~ 2717394 (+)
G238534 NA other upstream 872972 1668410 ~ 1669244 (+)
G237840 NA other upstream 2122284 418925 ~ 419932 (+)
G237680 NA other upstream 2521054 20902 ~ 21162 (+)
G239761 NA other downstream 1619340 4162250 ~ 4213402 (+)
G239755 NA other downstream 1711300 4254210 ~ 4255092 (+)
CI01000055_04265119_04272728 NA other downstream 1721117 4265119 ~ 4273913 (+)
CI01000055_05163240_05166231 PIGY, PYURF other downstream 2622582 5162990 ~ 5166647 (+)
G240099 NA other downstream 2993608 5525472 ~ 5544153 (+)

Expression


Co-expression Network