CI01000055_03453919_03456503


Basic Information

Item Value
gene id CI01000055_03453919_03456503
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000055
NCBI id null
chromosome length 6774723
location 3453330 ~ 3456648 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000055_03453919_03456503.mRNA
CCATAAAAACAATCAATTTTAAAAAAGGTGATTATTTAAACCAATATTTGCGTGTGGAACGTATTTGTTTGTTTGTATGTGTATGTTTATTAGGGCATCCCGTCGATTCTAATAAGGTGCTTCACTTTTTCCTCATGGTTAAGCTTAGCAATATGCTAACACCAACAGCAAGCTGTACGAGGTTTTGAGCGTTCCAAATCAGTTTTGAGACCCATCTCGCACAGCCTGTACTTAGGGGCCGTTCACACAGAATGCGTTTTTTTGCCTTTAGTATGGTACTGCGGAAGTGGAATTAAAAAATGCAAGGTCAAGAGACTCTTTAAAGTTAAAACTACTACGCAAGCGCAACAAACACGTTCGACTAGCTAAGAACGTTCACATGGAAAACAATGAAAAAACGCAGGTTTTTCTATTTTTTGGGAACAGACCCATTGAGTCCAACAACACTATTGCTCGTGTGGTATTGCTTAAAATATATAGCTTACTGCATACAGGCTACTTTGAAAGTACTATACTTACTGAAATATAATCTAATGTTTAGTATTCATATGCAGTATATCTAAGTAAGATTGCACAACTCTTTCAAAGCATGTTCACTGCAATGCAAATTGACTTGGTGTTGTGCAATGACGTGCGCCAGAGGAGGCGTGGCAGTCGCACAACAGCGCGAGGCGCATCTGAAAGAGCTGTAGAAGAGGATAACATCTCATCACATCACTTCAGAATCAGCTTGAGGAATCAGGGCTCTCAAAGTAAACCTGACACAAACCGGTCTAGACTCATCTGCTTCATATTAAGACAGCTGACAGGCTGGAAAGTCTTCTTCACGCGTGGAGAATGGATAAGCACAAAGCTCATGGAACCAGATCTCACCCTTGAGGTCCGGCATGATACCAGCATGTTTCCGGTCCCACCCACGGGCTCTGCTGCCTGGGCCAGCGCTCAGAGCGTGTCAGCGTTCCAGAATGTTGCTGGAGACACAGGGACGTCTCGTGCATCTTAATAAAGACAGCCTGCGTGCTGGAAGCAGCTCCAAAGGCGTCCCAGAATGAGAGATCAGCACTTTTTTCCCAAAATGGGTCCTTGAGTTCATGCCCTCATTACGCTCACTTCTGAAGAGAGTCAACAGGGAAGCAGCATGCTTATTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000055_03453919_03456503.mRNA True 1148 mRNA 0.44 2 3453330 3456648

Neighbor

gene id symbol gene type direction distance location
CI01000055_03392185_03445744 ABLIM1 coding upstream 6641 3392185 ~ 3446689 (+)
CI01000055_03194041_03223541 GFRA1B coding upstream 229769 3193037 ~ 3223561 (+)
CI01000055_02892577_02901154 BMS1 coding upstream 551504 2892475 ~ 2901826 (+)
CI01000055_02886631_02891978 BMS1 coding upstream 561277 2886631 ~ 2892053 (+)
CI01000055_02883892_02885021 MXTX2 coding upstream 567961 2883763 ~ 2885369 (+)
CI01000055_03471384_03476628 NA coding downstream 14106 3470754 ~ 3476855 (+)
CI01000055_03482922_03497329 AFAP1L2 coding downstream 25794 3482442 ~ 3497616 (+)
CI01000055_03532706_03537026 NA coding downstream 74726 3531374 ~ 3537194 (+)
CI01000055_03539420_03563869 CCDC186 coding downstream 82500 3539148 ~ 3563895 (+)
CI01000055_03604945_03612832 DCLRE1A coding downstream 148297 3604945 ~ 3613140 (+)
G239526 NA non-coding upstream 105794 3347268 ~ 3347536 (+)
G239499 NA non-coding upstream 133870 3316914 ~ 3319460 (+)
G239509 NA non-coding upstream 146156 3306896 ~ 3307174 (+)
G239457 NA non-coding upstream 215133 3237988 ~ 3238197 (+)
G239535 NA non-coding downstream 52469 3509117 ~ 3518130 (+)
G239546 NA non-coding downstream 124253 3580901 ~ 3581110 (+)
G239565 NA non-coding downstream 168135 3624783 ~ 3625005 (+)
G239598 NA non-coding downstream 248376 3705024 ~ 3705225 (+)
G239599 NA non-coding downstream 250819 3707467 ~ 3708004 (+)
CI01000055_02542526_02542861 NA other upstream 909212 2542216 ~ 2544118 (+)
G238534 NA other upstream 1784086 1668410 ~ 1669244 (+)
G237840 NA other upstream 3033398 418925 ~ 419932 (+)
G237680 NA other upstream 3432168 20902 ~ 21162 (+)
G239761 NA other downstream 705602 4162250 ~ 4213402 (+)
G239755 NA other downstream 797562 4254210 ~ 4255092 (+)
CI01000055_04265119_04272728 NA other downstream 807379 4265119 ~ 4273913 (+)
CI01000055_05163240_05166231 PIGY, PYURF other downstream 1708844 5162990 ~ 5166647 (+)
G240099 NA other downstream 2079870 5525472 ~ 5544153 (+)

Expression


Co-expression Network