Item | Value |
---|---|
gene id | CI01000055_03539420_03563869 |
gene name | CCDC186 |
gene type | coding |
species | grasscarp (Ctenopharyngodon idella) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | CI01000055 |
NCBI id | null |
chromosome length | 6774723 |
location | 3539148 ~ 3563895 (+) |
genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
symbol | description |
---|---|
ccdc186 | Predicted to enable small GTPase binding activity. Predicted to be involved in vesicle cytoskeletal trafficking. Predicted to be active in trans-Golgi network. Orthologous to human CCDC186 (coiled-coil domain containing 186). |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
CI01000055_03539420_03563869.mRNA | True | 3754 | mRNA | 0.48 | 21 | 3539148 | 3563895 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
CI01000055_03532706_03537026 | NA | coding | upstream | 1954 | 3531374 ~ 3537194 (+) |
CI01000055_03482922_03497329 | AFAP1L2 | coding | upstream | 41532 | 3482442 ~ 3497616 (+) |
CI01000055_03471384_03476628 | NA | coding | upstream | 62293 | 3470754 ~ 3476855 (+) |
CI01000055_03453919_03456503 | NA | coding | upstream | 82500 | 3453330 ~ 3456648 (+) |
CI01000055_03392185_03445744 | ABLIM1 | coding | upstream | 92459 | 3392185 ~ 3446689 (+) |
CI01000055_03604945_03612832 | DCLRE1A | coding | downstream | 41050 | 3604945 ~ 3613140 (+) |
CI01000055_03653282_03656353 | NA | coding | downstream | 89313 | 3653208 ~ 3656423 (+) |
CI01000055_03667192_03685378 | NRAP | coding | downstream | 102841 | 3666736 ~ 3685893 (+) |
CI01000055_03717618_03733174 | THBS2, THBS2B | coding | downstream | 152158 | 3716053 ~ 3733597 (+) |
CI01000055_03745295_03748598 | KCNK1A | coding | downstream | 179590 | 3743485 ~ 3749226 (+) |
G239535 | NA | non-coding | upstream | 21018 | 3509117 ~ 3518130 (+) |
G239526 | NA | non-coding | upstream | 191612 | 3347268 ~ 3347536 (+) |
G239499 | NA | non-coding | upstream | 219688 | 3316914 ~ 3319460 (+) |
G239509 | NA | non-coding | upstream | 231974 | 3306896 ~ 3307174 (+) |
G239546 | NA | non-coding | downstream | 17006 | 3580901 ~ 3581110 (+) |
G239565 | NA | non-coding | downstream | 60888 | 3624783 ~ 3625005 (+) |
G239598 | NA | non-coding | downstream | 141129 | 3705024 ~ 3705225 (+) |
G239599 | NA | non-coding | downstream | 143572 | 3707467 ~ 3708004 (+) |
G239646 | NA | non-coding | downstream | 305837 | 3869732 ~ 3925859 (+) |
CI01000055_02542526_02542861 | NA | other | upstream | 995030 | 2542216 ~ 2544118 (+) |
G238534 | NA | other | upstream | 1869904 | 1668410 ~ 1669244 (+) |
G237840 | NA | other | upstream | 3119216 | 418925 ~ 419932 (+) |
G237680 | NA | other | upstream | 3517986 | 20902 ~ 21162 (+) |
G239761 | NA | other | downstream | 598355 | 4162250 ~ 4213402 (+) |
G239755 | NA | other | downstream | 690315 | 4254210 ~ 4255092 (+) |
CI01000055_04265119_04272728 | NA | other | downstream | 700132 | 4265119 ~ 4273913 (+) |
CI01000055_05163240_05166231 | PIGY, PYURF | other | downstream | 1601597 | 5162990 ~ 5166647 (+) |
G240099 | NA | other | downstream | 1972623 | 5525472 ~ 5544153 (+) |
species | gene id | symbol | gene type | chromosome | NCBI id | location |
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