XLOC_009977 (CR848817.1)


Basic Information

Item Value
gene id XLOC_009977
gene name CR848817.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 27415697 ~ 27415812 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00019863
GCtgtcagctagctctctgcagctctcacatggtcacctactgaagctaagcagggctgcgcccagtcagtacctggaatGGAaggccacatgggaaagctaggttgctgccagaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000107860

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00019863 True 116 rRNA 0.56 1 27415697 27415812

Neighbor

gene id symbol gene type direction distance location
XLOC_009976 stx17 coding upstream 10237 27383717 ~ 27405460 (+)
XLOC_009975 nr4a3 coding upstream 45915 27345383 ~ 27369782 (+)
XLOC_009974 sec61b coding upstream 184038 27224068 ~ 27231659 (+)
XLOC_009973 LO017763.1 coding upstream 208900 27206669 ~ 27206797 (+)
XLOC_009972 galnt1 coding upstream 315222 26863414 ~ 27100475 (+)
XLOC_009978 invs coding downstream 26737 27442549 ~ 27502702 (+)
XLOC_009979 si:ch211-197h24.6 coding downstream 127496 27543308 ~ 27558896 (+)
XLOC_009980 tmem67 coding downstream 148458 27564270 ~ 27581488 (+)
XLOC_009981 si:ch211-197h24.8 coding downstream 177886 27593698 ~ 27602512 (+)
XLOC_009982 si:ch211-197h24.9 coding downstream 187927 27603739 ~ 27609172 (+)
XLOC_009964 BX537166.1 non-coding upstream 771871 26640677 ~ 26643826 (+)
XLOC_009961 NA non-coding upstream 881940 26531777 ~ 26533757 (+)
XLOC_009960 NA non-coding upstream 904588 26509385 ~ 26511109 (+)
XLOC_009959 CR391910.1 non-coding upstream 919804 26494756 ~ 26495893 (+)
XLOC_009984 NA non-coding downstream 424115 27839927 ~ 27873367 (+)
XLOC_009986 NA non-coding downstream 633742 28049554 ~ 28050028 (+)
XLOC_009987 NA non-coding downstream 854203 28270015 ~ 28371330 (+)
XLOC_009989 CR936250.1 non-coding downstream 972234 28388046 ~ 28388163 (+)
XLOC_009994 NA non-coding downstream 1244583 28660395 ~ 28667333 (+)

Expression


Co-expression Network